Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02311 ATGGATCATCATCAGCAGCAGCAGCATCAACAAGGAAGTGAACCTTCTACAACAACCAAAGTTGAAAGAAAGATCATAGAGAGAAACAGAAGAAATAAAATGAAGGATCTCTACTCCAAACTCAACTCTCTTCTCCCAAGCTATAGCCCCACGGAAGTGTTACCATTGCCTGATCAAATAGATGAAGCCGTGAAATATATCAAAAGCTTAGAGAAGAAGGTGAAGATGGCAAAGGAGAAGAAGGAGAGGTTGCTAAAAGGGAGGAATAACAAGAAGAGATCTCGCGGTTTCGATGAGAAAAATATTACAAAATCTCCAATGATAGATGTTCATGAAATGGGTAATTCCTTGCTTCAAGTGGTCTTGACATGCGGGTTTGAGAACAAGTTCCTTTTCAATGAGATTATTCGCATATTGCATGAAGAGAAGGTTGAGATTGTTAGTGTCAATTCTTCTTCGCAACCTGGAGATTCAATGATTCATGTTTTGCATGCAGAGATTCCTTCCGCATTCCAGCAATTTGGAGCGGCAAGAGTGAGTGAGAGATTGAAGAGGTTTGTGAATGGATCAATCAGTGATGTGGATATAGATCCAGGGTTTTGGGATGATTTTGAAATTGATACTGACATTTGGGAGCTTCCAGATCTTTCATCAGTAGTAAGTAAGGGTTTTCCAAATCCTTTGTAA 687 0.3959 MDHHQQQQHQQGSEPSTTTKVERKIIERNRRNKMKDLYSKLNSLLPSYSPTEVLPLPDQIDEAVKYIKSLEKKVKMAKEKKERLLKGRNNKKRSRGFDEKNITKSPMIDVHEMGNSLLQVVLTCGFENKFLFNEIIRILHEEKVEIVSVNSSSQPGDSMIHVLHAEIPSAFQQFGAARVSERLKRFVNGSISDVDIDPGFWDDFEIDTDIWELPDLSSVVSKGFPNPL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02311 228 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 70 IPR011598 GO:0046983
Arst8g02311 228 Coils Coil 60 87 - -
Arst8g02311 228 Gene3D - 8 97 IPR036638 GO:0046983
Arst8g02311 228 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 15 187 - -
Arst8g02311 228 SMART finulus 24 76 IPR011598 GO:0046983
Arst8g02311 228 MobiDBLite consensus disorder prediction 1 22 - -
Arst8g02311 228 Pfam Helix-loop-helix DNA-binding domain 20 71 IPR011598 GO:0046983
Arst8g02311 228 FunFam Transcription factor bHLH162 11 96 - -
Arst8g02311 228 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 86 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02311 Arst-Chr8 32469894 32470951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02311 21 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.640 2.35e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst8g02311 HLH 2.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02311 - - aip:107610492 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02311 8 32469894 32470951 Arst8g02311 8 32469894 32470951 ECH