LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g02307	ATGAAGATGATGATGATGGTTCATGATATTCATACCTTGTTCTTCTTCATGGCCATTCTCAATCTTAACATAGCTCTTTTGAGTTGTGTGTCAGCAACTGAATTTGTGTATAACAGAAACTTCAACTCCACAAACACCAAGCTCTATGGAAATGCCACAATCCAAAACTCCATTCTCTCTCTCACTAACCAAACTTACTTTTCCATTGGCCGTGCCTTTTACCCTTTCAAGATACCAATGAAGAAACAATCAAATTCTACCCTTCTTCCCTTTTCAACCTCTTTCATATTCTCCATTGCTCCTATCAAGAACTTCCCCATTGCTCATGGCTTTGCTCTCTTCTTCACTCCTGTCATGGCCATCCATGGTGAACTCTCAGGGAACTACATGGGACTATTTAACCGTTCCACAGCAGGTAACGCCTCAAACCATGTATTTGCCATTGAGTTTGATGATTTTAGGAATGAGGAGTTCAATGAATTGAATGATAACCATGTTGGTGTTGATGTGAATTCAATGATGTCTGAGTATTCTGAACCTGCTGGGTTTTGGGGTGGGAAAGATGGTGAAACAATGGAGGAATTGAAGCTTGCTAGTGGTGAAAATTATCAGGTTTGGATTGAGTTTGATGGTTCACATATCAATGTTACTATGGCCATAGCAGGGCATAGGAAGCCTCAAAGGCCTTTGATTCATAATAAGCCTATTAACCTTTCTGGGGTTTTCTTGGATGAGATGTATGTGGGGTTTTCTGGGGCAACAGGGAGAATGGTTGATGAGTGTAGAATCTTGGCTTGGAGTTTTAGCAATTCGAATTTTTCGATCGGTGATGCCTTGCACACCAACCGTTTGCCTTTATTCGTGCATCCAAAGGCATTGGTTTATAGATCAAAATATTTCATTTTGGGGGTCATTTTTGGTGGATTGATAGTTATTGGTTGTGGTACTTTGGTGTTTATGAGTTTATTATTAAGATCCAAAGGAAAAAGAGGAGGGAAAGATGAACAGGTTGAAGATTGGGAATTGGAATATTGGCCTCACAGAATTAGCTATGAAGAGATTTGTGTTGCGACGAATGGATTCTCCGAGGAGAATGTGATTGGGAATGGGACAAGTGGGAGAGTTTACAAGGGAGTGTTGAAAGGTGTAGAAGTCGCGGTTAAGAGATTCAACCATGAAACTCAGCATGAGATGAGAGAGTTTCTGGCAGAGATCTCAAGCCTAGGGAGAATGAAACACAGGAATTTGGTTGGTTTCAGAGGGTGGAGCAAAAAAAAAGGAGGGAAATTGATCCTTGTATATGATTATATGGGGAATGAGAGCTTGGATAAGAGAATTTTCGAGTGTGAAGATGACACCATGATACTCAGCTGGGAACTCAGGCTCAGTGTGCTTCAAAATGTAGCTTGTGGAATTTTGTACCTACATGAAGGCTGGGAATTCGAGGTCTTGCATAGAGATATTAAAGCAAGTAATGTACTACTCGACAAGGATATGAACGCACGATTGGGAGATTTCGGCCTAGCCAGGCTGCACCGACAGGAAAACGTGTCTGACACAACAAGAGTGATTGGAACTCTGGGTTACATGGCACCAGAGCTAGTCCGAATTGGTCGACCATCAACCGCTACTGATGTGTACAGTTTTGGAATATTGATCTTGGAAGTGGTGTGTGGGAGAAGGCCTATTGTGGTAGATAAACCTGCATTGGTTGATTGGGTATTTTCCCTTATGGAGAAAGGGCAATTGAGTTTTGCCGTTGATGAGAGGCTGAAGAATCAAAGTGGTTTCAGCACTGAGGAAGTTGAGAGAGTGTTGCATTTGGGTTTGTTATGTGCAAGTTCAGACCCTGGTATTAGGCCAGCAATGAGGCAAGTGGTGAAAATTTTGGAAGGAATAAGAAACTGTGATTGTAATGATTCATGCATCAATATGAGTCTTCTTGGGAAAATAAACTCAGCGGCATCATGGTCTAGGAGTTCAACAAGTTCTGCCACTGTGAATTATCCTACTTTTGATGAAATTTTGCAGACTAAGTTCTATTCCACAGCATCTCAAAGCTTCTCTTATCCAAGCCTACAACCAGATTCTGAGTCAATCTCAGAAGGAAGATGA	2115	0.4147	MKMMMMVHDIHTLFFFMAILNLNIALLSCVSATEFVYNRNFNSTNTKLYGNATIQNSILSLTNQTYFSIGRAFYPFKIPMKKQSNSTLLPFSTSFIFSIAPIKNFPIAHGFALFFTPVMAIHGELSGNYMGLFNRSTAGNASNHVFAIEFDDFRNEEFNELNDNHVGVDVNSMMSEYSEPAGFWGGKDGETMEELKLASGENYQVWIEFDGSHINVTMAIAGHRKPQRPLIHNKPINLSGVFLDEMYVGFSGATGRMVDECRILAWSFSNSNFSIGDALHTNRLPLFVHPKALVYRSKYFILGVIFGGLIVIGCGTLVFMSLLLRSKGKRGGKDEQVEDWELEYWPHRISYEEICVATNGFSEENVIGNGTSGRVYKGVLKGVEVAVKRFNHETQHEMREFLAEISSLGRMKHRNLVGFRGWSKKKGGKLILVYDYMGNESLDKRIFECEDDTMILSWELRLSVLQNVACGILYLHEGWEFEVLHRDIKASNVLLDKDMNARLGDFGLARLHRQENVSDTTRVIGTLGYMAPELVRIGRPSTATDVYSFGILILEVVCGRRPIVVDKPALVDWVFSLMEKGQLSFAVDERLKNQSGFSTEEVERVLHLGLLCASSDPGIRPAMRQVVKILEGIRNCDCNDSCINMSLLGKINSAASWSRSSTSSATVNYPTFDEILQTKFYSTASQSFSYPSLQPDSESISEGR	704

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g02307	704	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	483	495	IPR008271	GO:0004672\|GO:0006468
	Arst8g02307	704	Gene3D	Transferase(Phosphotransferase) domain 1	437	646	-	-
	Arst8g02307	704	CDD	STKc_IRAK	367	633	-	-
	Arst8g02307	704	SUPERFAMILY	Protein kinase-like (PK-like)	338	631	IPR011009	-
	Arst8g02307	704	FunFam	L-type lectin-domain containing receptor kinase S.4	437	641	-	-
	Arst8g02307	704	Gene3D	-	31	280	-	-
	Arst8g02307	704	SUPERFAMILY	Concanavalin A-like lectins/glucanases	32	274	IPR013320	-
	Arst8g02307	704	FunFam	L-type lectin-domain containing receptor kinase V.9	31	278	-	-
	Arst8g02307	704	ProSitePatterns	Protein kinases ATP-binding region signature.	367	388	IPR017441	GO:0005524
	Arst8g02307	704	ProSiteProfiles	Protein kinase domain profile.	361	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g02307	704	Pfam	Protein kinase domain	362	627	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g02307	704	Gene3D	Phosphorylase Kinase; domain 1	325	436	-	-
	Arst8g02307	704	PANTHER	-	50	634	-	-
	Arst8g02307	704	SMART	serkin_6	361	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g02307	704	CDD	lectin_legume_LecRK_Arcelin_ConA	33	271	IPR001220	GO:0030246
	Arst8g02307	704	Pfam	Legume lectin domain	33	272	IPR001220	GO:0030246
	Arst8g02307	704	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	323	436	-	-
	Arst8g02307	704	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g02307	Arst-Chr8	32261135	32263503	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g02307	30	585	Receptor kinase-like Gene Family	AT4G04960	53.488	0.0	565

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Arst8g02307		Pkinase	9.6e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g02307	-		-	gmx:100804025	1026.16