Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02295 ATGGCAGCAAGCACGACTAGCATCCCATCTCACATAAAAGCCTGGGTCTACAATGAATATAGGAACATTGAAGAGACTCTCAAGTTAGACCCAAACATAGCTACACCACAAATCAAGGATGACCAAGTTCTCATCAAGGTTGTGGCTGCAGCCCTTAACCCTGTAGATTATAAGAAGGCCCTTGGACTTTTCAAGGACACTGACTCTCCATTTCCAACAGCTCCAGGGTATGATGTTGCTGGTGTGGTGGTGAAAGTGGGAAGCAAAGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCAATGAGAATGCTGGGAATCCAAAGGCTATTGGGACCTTAGCAGAGTATACTAGTGCCGAAGAGAAGGTGTTGGCACACAAACCCTCTAATTTGAGCTTTATTGAAGCTTCTAGCCTCCCTTTAGCAATCATCACTGCTTATCAAGGTATCGAGAGAGCTCAATTTTCTTCTGGAAAATCTATTCTTGTTCTTGGAGGTGCTGGTGGAGTTGGAAGCCTTGTTATTCAGTTAGCCAAGCAAGTTTTTGGTGCATCTAAGGTAGCAGCTACTGCTAGTACTGGAAAATTGGAGCTGTTAAGGGAGTTAGGAGCAGACTTGCCTATTGATTATACAAAGGAGAATTTTGAAGAACTGCCAGAAAAATTTGATTTTGTGTATGACACAGTAGGCCAAAGTGACAGGGCATTGAAGGCTACCAAAGAAGGAGGACAAGTAATAACAATAGCAGGACCTGCAAGTCCACCTGCAATATGGTTCTTTCTCCATTCAGATGGTGCTGTCTTGGACAAACTCAAACCTTATTTGGATAGTAGCAAGGTGAAGCCAGTGTTGGATCCCAAGAGCCCTCTCCCATTTTCTAAGGCAATAGAAGCATTTTCCTACCTCAAGACCAATAGAGCCACCGGAAAAGTTGTTATACATCCAATCCCATAA 963 0.4299 MAASTTSIPSHIKAWVYNEYRNIEETLKLDPNIATPQIKDDQVLIKVVAAALNPVDYKKALGLFKDTDSPFPTAPGYDVAGVVVKVGSKVKKFKVGDEVYGDINENAGNPKAIGTLAEYTSAEEKVLAHKPSNLSFIEASSLPLAIITAYQGIERAQFSSGKSILVLGGAGGVGSLVIQLAKQVFGASKVAATASTGKLELLRELGADLPIDYTKENFEELPEKFDFVYDTVGQSDRALKATKEGGQVITIAGPASPPAIWFFLHSDGAVLDKLKPYLDSSKVKPVLDPKSPLPFSKAIEAFSYLKTNRATGKVVIHPIP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02295 320 SMART PKS_ER_names_mod 22 316 IPR020843 GO:0016491
Arst8g02295 320 Gene3D - 19 316 - -
Arst8g02295 320 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 320 IPR044626 GO:0016628
Arst8g02295 320 Gene3D - 153 267 - -
Arst8g02295 320 Pfam Alcohol dehydrogenase GroES-like domain 41 109 IPR013154 -
Arst8g02295 320 SUPERFAMILY GroES-like 9 168 IPR011032 -
Arst8g02295 320 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Arst8g02295 320 Pfam Zinc-binding dehydrogenase 205 316 - -
Arst8g02295 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 260 IPR036291 -
Arst8g02295 320 CDD MDR_like_2 13 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02295 Arst-Chr8 32126845 32136028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02295 68 231 Monolignol Biosynthesis Gene Families AT1G72680 27.461 2.14e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02295 K18980 - gmx:100791274 491.115