Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02224 ATGGGAAGAGCTCCTTGCTGTGACAAGGCAAATGTGAAGAGAGGGCCATGGTCACCTGAAGAAGACACAAAGCTGAAAGAGTACATAGACAAGCATGGAACTGGTGGAAACTGGATCGCTCTTCCTCACAAAGCTGGTCTAAAGAGGTGTGGAAAAAGTTGTAGATTGAGATGGCTTAACTATTTGAGGCCTAACATTAAGCATGGTGAATTCTCCGACGAGGAAGACAGAATAATCTGCAGTCTTTATGCTAATATTGGAAGCAGATGGTCAATTATAGCAGCACAGTTGCCAGGAAGGACTGACAATGATATCAAGAACTATTGGAACACCAAGCTCAAGAAGAAGCTCATGGCTTTGCTTCCGACTCATCATCATAATCAACAAAACCCACCACCA 399 0.4361 MGRAPCCDKANVKRGPWSPEEDTKLKEYIDKHGTGGNWIALPHKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMALLPTHHHNQQNPPP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02224 133 CDD SANT 70 111 IPR001005 -
Arst8g02224 133 SMART sant 13 64 IPR001005 -
Arst8g02224 133 SMART sant 67 115 IPR001005 -
Arst8g02224 133 FunFam Transcription factor MYB36 70 132 - -
Arst8g02224 133 Gene3D - 69 131 - -
Arst8g02224 133 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Arst8g02224 133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Arst8g02224 133 CDD SANT 16 62 IPR001005 -
Arst8g02224 133 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Arst8g02224 133 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Arst8g02224 133 Gene3D - 7 68 - -
Arst8g02224 133 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Arst8g02224 133 FunFam Transcription factor RAX3 7 68 - -
Arst8g02224 133 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Arst8g02224 133 PANTHER OS09G0431300 PROTEIN 1 129 - -
Arst8g02224 133 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02224 Arst-Chr8 31253373 31254090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02224 1 119 MYB Transcription Factor Family AT5G57620 89.076 6.59e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g02224 Myb_DNA-binding 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02224 K09422 - gmx:100796382 257.299