Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02209 ATGGAGTTTGAGCTTGAGAACCCCTTTGATGAGAACTACCATAACCTTCCCTTTGAAGCTGTCTCCTCCCTCTTCCACATTGAATCTGAACACATCCCTCCCTCCAATTACTTCCACACTCTCAAGGCCACTGATTTTGATATCTCTCTTAGAACACATCTCATTTCCTTCATATCACAGTTGTCCTGCACCTTTGATCCGGTTCTGCCTTACCTTGCTACCAACTATCTAGATCGCTATCTTGCCAACCAACCCATATTGCAACCAAAGCCATGGACCAACAAGCTTCTTGCAATCTCTTGCTTCTCTCTAGCTGCTAAGATGTTAAAGATAGAGTATTCTCCCACTGATGTTCAGGTTCTTGTGAACAATCATGGTGATGGTGGTGTCATATTTGAGGCACAAACAATACAAAGAATGGAGGCTATTGTGTTGGGGACACTACAATGGCGCATGCGTTCCATAACACCATTCTCATTCATCCCTTTCTTCATCAACTTGTTGGGCATCAATGACCCTTCATTCAACCAGGTACTCAAAGATAGGGCCTCCCAGATCATATTGAAGTCACAAACAGAGATAAAGGTTTTAGAATTCAAGCCATCTGTAATTGCAGCATCAGCTCTACTGTCTGCTTCACATGAGTTGTTTCCCTTTCAGTATCCATGCTTCTTTCGAGCAATATCTGATTCTTCATATGTAAATAAAGAGAGCATGTTGCAGTGCTATAATGTGATACAGGAAATGGGTAGAGAGGAGTACGAATCATCTGTGTTGAATGTGAATTCAAGTTCAGACACACCGGTTAATGTATTGGATGAACATTTTCTGAGCTTGGAAGAAAGTGAAAAAACCAACATTGCTCCCACCACACACAATAAGGACCTCAAAAGAAGATCAAAGTTCACTGCTTATGGTAACAACAACAACAACAACCACTCCCTCCATTCTCACCATCAATGCTAG 966 0.4182 MEFELENPFDENYHNLPFEAVSSLFHIESEHIPPSNYFHTLKATDFDISLRTHLISFISQLSCTFDPVLPYLATNYLDRYLANQPILQPKPWTNKLLAISCFSLAAKMLKIEYSPTDVQVLVNNHGDGGVIFEAQTIQRMEAIVLGTLQWRMRSITPFSFIPFFINLLGINDPSFNQVLKDRASQIILKSQTEIKVLEFKPSVIAASALLSASHELFPFQYPCFFRAISDSSYVNKESMLQCYNVIQEMGREEYESSVLNVNSSSDTPVNVLDEHFLSLEESEKTNIAPTTHNKDLKRRSKFTAYGNNNNNNHSLHSHHQC 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02209 321 CDD CYCLIN_AtCycD-like_rpt2 155 246 - -
Arst8g02209 321 PANTHER CYCLINS 24 256 IPR039361 -
Arst8g02209 321 SMART cyclin_7 52 146 IPR013763 -
Arst8g02209 321 Pfam Cyclin, C-terminal domain 155 257 IPR004367 -
Arst8g02209 321 FunFam D6-type cyclin 34 150 - -
Arst8g02209 321 FunFam D6-type cyclin 151 244 - -
Arst8g02209 321 Gene3D - 23 244 - -
Arst8g02209 321 SUPERFAMILY Cyclin-like 19 152 IPR036915 -
Arst8g02209 321 SUPERFAMILY Cyclin-like 137 251 IPR036915 -
Arst8g02209 321 SMART Cyclin_C_2 155 271 IPR004367 -
Arst8g02209 321 Pfam Cyclin, N-terminal domain 22 152 IPR006671 -
Arst8g02209 321 Gene3D - 34 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02209 Arst-Chr8 31016308 31018700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02209 1 301 Core Cell Cycle Gene Families AT4G03270 42.812 8.96e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02209 K18812 - gmx:100799951 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02209 8 31016308 31018700 Arst8g02209 8 31016308 31018700 ECH
Arst8g02209 8 31016308 31018700 Arst3g01716 3 19831186 19833320 PCT