Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02208 ATGGCGAGAACCCGTTGCGTTGACAAAAGTGGAATGAAGAAAGGTGCTTGGACTCCCGAAGAAGATAGCAAGCTAATTGCTTATATTACTAGGTATGGTTCCTGGAATTGGCGACAACTCCCTAGGTTTGCAGGTCTGGCAAGATGTGGAAAGAGTTGCAGATTGAGATGGCTCAATTATCTGAGGCCCAACATCAAACGAGGGAACTACACTCAAGAAGAAGAAGATATTATTGTTACAATGCACAAGAAGATAGGAAACAAGTGGTCTGTGATTGCATCCAATCTACCAGGAAGAACAGATAACGATATAAAGAATCATTGGCACTCCTCCCTCAAGAGGCGCTCTCATCAGAGAAACACACGTCAAAAGGTTAAGGCCACCGCCGCTGCCACCGCCCCTGCCGCTGCCATTGCCGCAGTGAACACCACCACCAACCCTAATAATAACAATAACGCTTCACTTCAATATTCTCCTCAGACCTCTTCTGACACTGTCTCTGGCCCCTTGTCCCCTCAATTATCCTCCAAAATAATCGCAACCAATAATCATAACGAAAATAATTCGGACTACTTTGACGACATCGATTTTTTGAATTATTATACACAGCACGCAATTGAAAATCTGTGGTCAGAGACATTTCTAGCTGAACAAATAGACAATTGTAACGGTGGTTTTGTTTCATTGGACACTACTACTACGCAGATCTCGGATTCTTCGGAATTGCTGTCTCCGCAATCATCATCATTATCAAGTGCAGAGAATAATGATAACTTATTTACCTTTGCAGAAACAACAGCGAAAGCTTTTGATGAAGTGTTTTGGACAGAACATTATGCTGTAGATTTGTCTTGTGTTCCAAATGAACTACTTACGCCTTCTGTGGACCCGTATGTTTGTCCTGTGGCTGTGTATGATGATTTAGATCTGTGGACTCAAAGCAATTTTACATGA 954 0.4235 MARTRCVDKSGMKKGAWTPEEDSKLIAYITRYGSWNWRQLPRFAGLARCGKSCRLRWLNYLRPNIKRGNYTQEEEDIIVTMHKKIGNKWSVIASNLPGRTDNDIKNHWHSSLKRRSHQRNTRQKVKATAAATAPAAAIAAVNTTTNPNNNNNASLQYSPQTSSDTVSGPLSPQLSSKIIATNNHNENNSDYFDDIDFLNYYTQHAIENLWSETFLAEQIDNCNGGFVSLDTTTTQISDSSELLSPQSSSLSSAENNDNLFTFAETTAKAFDEVFWTEHYAVDLSCVPNELLTPSVDPYVCPVAVYDDLDLWTQSNFT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02208 317 FunFam MYB-related transcription factor 13 66 - -
Arst8g02208 317 MobiDBLite consensus disorder prediction 143 170 - -
Arst8g02208 317 CDD SANT 69 112 IPR001005 -
Arst8g02208 317 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst8g02208 317 CDD SANT 16 61 IPR001005 -
Arst8g02208 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst8g02208 317 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst8g02208 317 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 231 - -
Arst8g02208 317 SMART sant 66 114 IPR001005 -
Arst8g02208 317 SMART sant 13 63 IPR001005 -
Arst8g02208 317 Gene3D - 6 67 - -
Arst8g02208 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst8g02208 317 Gene3D - 69 135 - -
Arst8g02208 317 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Arst8g02208 317 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst8g02208 317 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02208 Arst-Chr8 30955088 30957623 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02208 1 179 MYB Transcription Factor Family AT1G06180 47.644 1.56e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g02208 Myb_DNA-binding 3.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02208 K09422 - gmx:100777107 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02208 8 30955088 30957623 Arst3g01711 3 19757024 19758831 PCT
Arst3g01690 3 19505088 19506554 Arst8g02208 8 30955088 30957623 PCT