Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02196 ATGCGAACTACTCTTGTAGTTTTCCTTGTTTCATTGCTGCAATGCACTTCTCAAGTGGTTGTAGCAAAAGATATTATGGAGTCTGGCCAAAACATAACTTCAGAATCTTCATCAAGCTTTCTTGTTTCAGCTGGACAGAGATTTGTACTAGGCTTCTTTCCTCGTCCCGAAAACACATCAGAAAGTTACCTGGGGATATGGTACAACACTAATCAAATACAATACCCTGGAAAACAAACAGTGGTATGGGTTGCCAACAGAGAGATTCCTGTTGTGAGTTCCAATGTTGGAGTCTTTCATATTGCAGATGATGGAAACCTTGTACTAGAAGATGCATCGAGTAAACGACGCTATTGGTCCACATCAATAAGCTCTGCATCCACGGCGACGAACAAAACAAGGAGAGTGCAGCTAATGGATTCTGGGAATCTGGTATTGTTCCATGAAGAAGAAGATGGAGATTACATATGGCAAAGCTTCCAACACCCCACAGACACGTTTCTTCCGGGAATGCAGATGGACATGGATGGCATGGAATTAAGGAGTGGAAACTTCACCTTCAAGATGGTTCGGAAGAAGCGTTATGTCATCTACTTGAATGATCAACAACTCTATTGGGAAAATGATGGACTCAATTCAGATGCACTGAGCCCTGACAAACTCGAATATTTAACTAACTGGACAGACATCGATATCCCTACGTCTTCACGTACGAAAGGTGTGAATCGGACGATGAAACTTTCAGCCACTATGAACATATCCAGCACTGGGACCTGGGAAGCCTTGTATAAGAAATACATGAACACAAGAATTGTGATGAATTCTTCAGGGGAGATACAGTATCTGAAGTGGGAAGAGGAAGACTCTACAGGTGCAGGATGGACGATGTTATGGAGGCAGCCATCGGACAAGTGCCATATATATAATTTTTGCGGCAACTTTAGTAGCTGCGACATTGCAGATGATTCGAGGATCTGCAAATGTTTACCAGGGTTTAAGGAGAATCAGATTCAGAGCCATGAGGGAGGGTCCAGATTCCCAGGATGTAACAGAAGTACACTATCACTGTATGACAGCAGAGGCATGATGTTCATTAACTTGACCATGGTGAGAGTGACCGCACCAGACCTCAAATCCCTCGCAGAAAGCGAAGATGAATGCCGGATTTCGTGCCTTAACATGTATCTTCCCCGGTGCCAAGCTTATTCGTATAATGGCTCTGTTTCAGATTATGATCGTCTTCCTCTCACATGTGGAATTTGGACACAGGATTTAACTACTCTTCAAGTGGTCCAAGATGATGGTGCTGCTACTGCTTCTCTTTCTGTTCTGGTCAACCGTTCAGATATAGCACCAAAGGCAAAATCATGTGAGCCTTGTGGTATATACGTAATTCCTTATCCCCTAAGCACTGGACCAAGCTGTGGGGATGCCACCTACAACAAGTTCATCTGCAACAACTCAACAGGGCAGCTTAACTTCACAATCTCCGGTGGAGAATCGTACCGAGTTACTTGGATAGACCAAAATACCAGAAGGTTTTACATTCAAACCAGCAATTCTTATCGCTGTGATTCCAGCAGTCAAAATAGAGTCCCTGATCCTCCCTTTAATGTCACCAACTGGTGCTACGGAGCAGATGAAATTGAGGTCAGTTGGGATCCAGCGCCAGAACCCCCCTGTAATCACCTCGCAGACTGCAATGATTGGCCTCATTCAACATGCCGACACAAATTTCATCCAGGGGAAAAGAGGTGCTTTTGCCATTCAAAATATCACTGGGATGCCTCAACTCTTACTTGTACTCAAGGAGAGGAATCAAAAAACCACAAATTGCTATTGGTTGTAACTCTTACCGTCATGCTTTTGCTAGCATTTCCAGTGATATTTGCATATGTATGGAGAATCAAGACAAACCCCAAGATTGACAGGGCGAACATTCTAATACAGGAGAGCTTGCATGATAGTGAAAGACAAGTCAAAGGTTTGATAGGCTTGGGAGGTTTAGAAGACAAACACAGTGAAAGCATTGCAGTGCCTTTTTATACTTACAGAAGCATTGTAGCAGCTACTGATAATTTCTCTGAGTCAAACAAGCTTGGAAGAGGAGGTTATGGACCAGTCTACAAGGGAAGGTTTCCCGGAGGCCAAGATATTGCTGTAAAAAGGCTTTCAAGTGTTTCAACACAAGGCTTAGAGGAATTCAAAAATGAGATTGTTTTGATTGCCAAACTCCAACATCGGAACCTTGTTAGACTCAGAGGCTATTGCATAAAGGGAGATGAGAAGATTTTACTTTATGAATACATGCCGAACAAGAGCTTGGACTCTTTCATCTTTGACCGTTCAAGAACTTTACTCCTTGAATGGCCAATGCGGTTTGACATAATCCTAGGCATTGCACGAGGATTGCTTTATCTTCACCAAGACTCTCAAAGAGAGTTCAATTGTAAACATATTGTTCATTACCGGATATTTACTCATGATTATTAGCTTGCTACATATAACAACCGATTTTTTTTTTTCTTTTCTAGCGGATATATGGCACCAGAATATGCTTTGGACGGGTATTTTTCAATCAAGTCCGATGTTTTCAGCTTTGGTGTAGTCTTATTAGAGATTCTCAGTGGAAAAAAGAACACAGGATTCTTTCAATTCAAACAAACTGCTACCCTTTTGGGATATGCATGGGGACTATGGACAGAGAATAGGCTTATGAATTTAATGGATACATCTTTCAGTGGAACTTGCAATGAGAATCAATTTACCAAGTGTGCACAAATTGCACTCTTGTGTGTGCAAGATGAACCAAGTGATCGACCAACCATGTCAACTGTTGTGACAATGCTTGATAGCGAAATTGCAACCATCCCTATTCCTACGCAACCAACATTTTATGCAATTAGAAGGACTACAAGCACTACTGCATCTTCTTCGAGCAGACCAGAAACAACCATGCAAATTGAGAGCAGTTATCAAGAAGGGAGATAG 2991 0.4216 MRTTLVVFLVSLLQCTSQVVVAKDIMESGQNITSESSSSFLVSAGQRFVLGFFPRPENTSESYLGIWYNTNQIQYPGKQTVVWVANREIPVVSSNVGVFHIADDGNLVLEDASSKRRYWSTSISSASTATNKTRRVQLMDSGNLVLFHEEEDGDYIWQSFQHPTDTFLPGMQMDMDGMELRSGNFTFKMVRKKRYVIYLNDQQLYWENDGLNSDALSPDKLEYLTNWTDIDIPTSSRTKGVNRTMKLSATMNISSTGTWEALYKKYMNTRIVMNSSGEIQYLKWEEEDSTGAGWTMLWRQPSDKCHIYNFCGNFSSCDIADDSRICKCLPGFKENQIQSHEGGSRFPGCNRSTLSLYDSRGMMFINLTMVRVTAPDLKSLAESEDECRISCLNMYLPRCQAYSYNGSVSDYDRLPLTCGIWTQDLTTLQVVQDDGAATASLSVLVNRSDIAPKAKSCEPCGIYVIPYPLSTGPSCGDATYNKFICNNSTGQLNFTISGGESYRVTWIDQNTRRFYIQTSNSYRCDSSSQNRVPDPPFNVTNWCYGADEIEVSWDPAPEPPCNHLADCNDWPHSTCRHKFHPGEKRCFCHSKYHWDASTLTCTQGEESKNHKLLLVVTLTVMLLLAFPVIFAYVWRIKTNPKIDRANILIQESLHDSERQVKGLIGLGGLEDKHSESIAVPFYTYRSIVAATDNFSESNKLGRGGYGPVYKGRFPGGQDIAVKRLSSVSTQGLEEFKNEIVLIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRSRTLLLEWPMRFDIILGIARGLLYLHQDSQREFNCKHIVHYRIFTHDYXLATYNNRFFFFFSSGYMAPEYALDGYFSIKSDVFSFGVVLLEILSGKKNTGFFQFKQTATLLGYAWGLWTENRLMNLMDTSFSGTCNENQFTKCAQIALLCVQDEPSDRPTMSTVVTMLDSEIATIPIPTQPTFYAIRRTTSTTASSSSRPETTMQIESSYQEGR 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02196 996 Gene3D Phosphorylase Kinase; domain 1 669 769 - -
Arst8g02196 996 SMART blect_4 23 163 IPR001480 -
Arst8g02196 996 MobiDBLite consensus disorder prediction 972 996 - -
Arst8g02196 996 Pfam S-locus glycoprotein domain 249 335 IPR000858 GO:0048544
Arst8g02196 996 Gene3D Transferase(Phosphotransferase) domain 1 770 957 - -
Arst8g02196 996 Pfam Protein tyrosine and serine/threonine kinase 697 950 IPR001245 GO:0004672|GO:0006468
Arst8g02196 996 ProSiteProfiles Protein kinase domain profile. 694 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02196 996 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 940 - -
Arst8g02196 996 Gene3D - 17 161 IPR036426 -
Arst8g02196 996 ProSiteProfiles PAN/Apple domain profile. 349 443 IPR003609 -
Arst8g02196 996 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 663 769 - -
Arst8g02196 996 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 209 IPR036426 -
Arst8g02196 996 ProSiteProfiles Bulb-type lectin domain profile. 33 159 IPR001480 -
Arst8g02196 996 SUPERFAMILY Protein kinase-like (PK-like) 677 988 IPR011009 -
Arst8g02196 996 Pfam D-mannose binding lectin 80 177 IPR001480 -
Arst8g02196 996 CDD B_lectin 40 163 IPR001480 -
Arst8g02196 996 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 830 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02196 Arst-Chr8 30771157 30775231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02196 684 966 Receptor kinase-like Gene Family AT4G23140 48.860 7.56e-92 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst8g02196 PK_Tyr_Ser-Thr 6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02196 - - aip:107612578 1854.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02196 8 30771157 30775231 Arst8g02196 8 30771157 30775231 ECH
Arst8g02196 8 30771157 30775231 Arst3g01668 3 19220986 19225730 PCT