LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g02192	ATGGATTCTGGGAACCTTATGCTGTTACAATATGATCAAACGGGGAAGACTACTACTATGTATCAGAGCTTCGATCACCCCACCGATACGTTTCTTCTGGGAATGAACATGGACTTGGATTTGAAGCTAACTTCTTGGAGCAGTGACAATGATCCTCAAAGTGGAAGCTACACCTTCATGATGGCTTCAGATGGAGACAATCTCAACTCTTATGTGATTTCGAAGAACAACCAGCTTTACTGGGAAAGAGGAACAAAGAATCTGAGTCCAGGGTCTATGTTTGGAACCGTAGATTTCTTGTTGAACAACCAAACAAGCACAGACGAAGACCCTTCTTCTGCAACAAACACTCCCCCCTACAAAAACATTGGTAACAGGTTTGGCAAAAAACAATTGCCGATTACGCGTGTTCCCGTTGATGAATTTAACAAGACGAGGCTAGTGATGAAGTACAATGGGGAGCTTCAGTTTCTAACATGGGATGGTATCCAACAAGATTGGATCGTTCGTTGGAAGGCCCCAAATAGCTCCTGCGACAGGTATAATATCTGTGGCAACTTCGCAAGCTGTGATTATAATCTGATTAATCTCAACATCAAGGAGTGCAAGTGTTTACCGGGATTCAGCAGTGTTATTGGTGGTGTCAGGGGATGTACAAGAAATTCAGGGTCATGCAGTGGAGACACTACAGCGTTCTTGAATTTAGTGAATGTGAAAGCAAGAGAACCACCCGATGAACAACACCCTGCAGCTAGTGAAACAGAATGCAAACAAATTTGTCTAAGCAAGTGTCCTGAGTGCCAGGCCTATTCGTATGATGCAAAGGCTGCAACTTCCAAAAGTGGTGATGATAATGATAGTGCCCAGAAAAGTTGTGGGATCTGGACAGAGGAATTAGTTACACTTCAAGAAGGCTTCCATGGTGATGATATTGATAATGATGAAGATAATGGTGCTCATAGTTTCTATGTTCGAGTAGACATATCAGACATAGAACCAACTCCAAGAACTTGTGAACCATGTGGGACAAACATGGTGCCTTATCCATTGAGCACTAGTTCGAACTGTGGTGACCCTATGTACTTCAACTTCAGATGTAACCTCTCAACAGGCCAGCTTAGCTTCATTTCTAGAACTTCCAATTCCAATGCAACTTATCAGAGAGTTGCTGTAGTGTATTCAGAATCCAGAAAGTTTGTCATGCAGGTTGATCCATCAAATACGCACTGCGAAGATGAGAGATCTGAAAGTAATGAAATTATGCAGATACACTCTCCATTTTCTGTTGCATATGATTGTTTTGATAAAGCCAAAGTAGAGGTTACTTGGGAACCACCGCATGAACCTGTTTGTTCTGAGCCTAAAGACTGCGTAGGTTGGAACCATTCAAGTTGTAAAGTAGCCAGTGGTGGAAAGAGGTGTCTTTGTGATAAAAATTATCATTGGGATGGGATTGCTCTAGAGTGTACTATAGCAGATAAAGGAAAATCCAAAAGTCAAATTTCTTTGATTCTTGGGATAACTCTTGGAAGTGTGATTATTCTGGCATGTGCAATAACTTTTGCTTATCTATGGAGAAGGAAAATAACTCCAAAGATAGGCAAGGAAAGCAATGTGAAACAACGAAAACGCTTCATTGATAGTATAAGACATGTGAAAGATTTGATTGAGGATGGGGGATTAGAAGAAAAGGACAATGAAGGCATAGAGGTACCTTATTTTGATTTTGAGAGCATAGTAGTAGCTACAGATAACTTCTCTGATGCAAATAAACTTGGACGCGGTGGTTATGGACCGGTTTACAAGGGTAAGCTTCAAAGTGGTGAAATTGTTGCAGTAAAGAGGCTTTCTAATGTCTCATCACAAGGCTTGCAGGAATTTAAGAATGAGGTTGTTTTGATAGCCAAACTTCAACATCGAAATCTTGTTAGATTAAGGGGCTACTGCATCAAAGGAGATGAAAAGATTCTACTATATGAATACATGCCTAACAAGAGCTTGGACTCATTTATATTCGATCCCACACAAAGCATACTTCTGGATTGGGAAATGCGATTTAACATAATCCGAGGAATTGCACGGGGTTTACTTTATCTTCACCAAGACTCCAGGTTAAGAGTAATTCATAGAGATTTAAAGACCAGTAACATTCTTCTTGACGAGGAAATGCAACCAAAATTTTCAGATTTTGGATTGGCAAAAATAGTGGCAGGCAAAGAATCTGAGGTAAATACCGAAAGAGTTGTAGGAACCTACGGATATATGTCTCCTGAGTATGCATTAGAAGGACTTTTCTCAACAAAATCTGATATTTTCAGCTTTGGTGTAGTGCTTCTTGAGATTCTTAGTGGAAAAAAGAACACCGGATTTTATCAATCTGACCAATTTACAAGCCTTTTGACTTATGCATGGAGACTATGGACAGAGAATAGGATGATAGATTTAATGGACATGTGCCTCAGTGAAAGTTGCATTGCAAATCAATTTATTAAGTGTGCACATATTGGACTCTTGTGTGTACAAGATGATCCAGCTGATAGACCAACCATGTCAACTGTTTTGACATTACTTGATGGTGAGATTGCAAGCCTTTCAAGCCCAAAACAACCAACCTTTTCTGGGAGCAGAGGCCAATCTAGCACAACTTCTTCCACTAGACCGGAAATAAGTCTTCACTTTGAAAGCAACACTCAAGAAGGTCGATAG	2706	0.4028	MDSGNLMLLQYDQTGKTTTMYQSFDHPTDTFLLGMNMDLDLKLTSWSSDNDPQSGSYTFMMASDGDNLNSYVISKNNQLYWERGTKNLSPGSMFGTVDFLLNNQTSTDEDPSSATNTPPYKNIGNRFGKKQLPITRVPVDEFNKTRLVMKYNGELQFLTWDGIQQDWIVRWKAPNSSCDRYNICGNFASCDYNLINLNIKECKCLPGFSSVIGGVRGCTRNSGSCSGDTTAFLNLVNVKAREPPDEQHPAASETECKQICLSKCPECQAYSYDAKAATSKSGDDNDSAQKSCGIWTEELVTLQEGFHGDDIDNDEDNGAHSFYVRVDISDIEPTPRTCEPCGTNMVPYPLSTSSNCGDPMYFNFRCNLSTGQLSFISRTSNSNATYQRVAVVYSESRKFVMQVDPSNTHCEDERSESNEIMQIHSPFSVAYDCFDKAKVEVTWEPPHEPVCSEPKDCVGWNHSSCKVASGGKRCLCDKNYHWDGIALECTIADKGKSKSQISLILGITLGSVIILACAITFAYLWRRKITPKIGKESNVKQRKRFIDSIRHVKDLIEDGGLEEKDNEGIEVPYFDFESIVVATDNFSDANKLGRGGYGPVYKGKLQSGEIVAVKRLSNVSSQGLQEFKNEVVLIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDPTQSILLDWEMRFNIIRGIARGLLYLHQDSRLRVIHRDLKTSNILLDEEMQPKFSDFGLAKIVAGKESEVNTERVVGTYGYMSPEYALEGLFSTKSDIFSFGVVLLEILSGKKNTGFYQSDQFTSLLTYAWRLWTENRMIDLMDMCLSESCIANQFIKCAHIGLLCVQDDPADRPTMSTVLTLLDGEIASLSSPKQPTFSGSRGQSSTTSSTRPEISLHFESNTQEGR	901

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g02192	901	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	707	719	IPR008271	GO:0004672\|GO:0006468
	Arst8g02192	901	SMART	serkin_6	586	857	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g02192	901	ProSiteProfiles	PAN/Apple domain profile.	225	318	IPR003609	-
	Arst8g02192	901	Pfam	Protein kinase domain	587	854	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g02192	901	CDD	STKc_IRAK	592	859	-	-
	Arst8g02192	901	Gene3D	Transferase(Phosphotransferase) domain 1	662	868	-	-
	Arst8g02192	901	PIRSF	SRK	1	354	IPR024171	GO:0004674
	Arst8g02192	901	PIRSF	SRK	455	900	IPR024171	GO:0004674
	Arst8g02192	901	MobiDBLite	consensus disorder prediction	864	901	-	-
	Arst8g02192	901	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	20	879	-	-
	Arst8g02192	901	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230	551	661	-	-
	Arst8g02192	901	Pfam	S-locus glycoprotein domain	138	209	IPR000858	GO:0048544
	Arst8g02192	901	Pfam	D-mannose binding lectin	1	42	IPR001480	-
	Arst8g02192	901	Gene3D	Phosphorylase Kinase; domain 1	558	661	-	-
	Arst8g02192	901	Pfam	PAN-like domain	225	300	IPR003609	-
	Arst8g02192	901	SUPERFAMILY	alpha-D-mannose-specific plant lectins	2	52	IPR036426	-
	Arst8g02192	901	SUPERFAMILY	Protein kinase-like (PK-like)	568	886	IPR011009	-
	Arst8g02192	901	ProSiteProfiles	Protein kinase domain profile.	586	872	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g02192	901	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	662	865	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g02192	Arst-Chr8	30742446	30746387	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g02192	574	872	Receptor kinase-like Gene Family	AT4G23140	57.377	4.81e-123	386

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Arst8g02192		Pkinase	1.5e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g02192	-		-	adu:107461924	1847.4