Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02179 ATGGAGCCCTACAGCATAGACCCCATGTTTTCAGGAATGAGCCTCCAATCACTCCTAAACCTCAACCCCTCCCTCCTCTCCTTCCTCACCGACCACCCTCCACAACCACAACTACCAAACCACCTTACTCTTCACCCCACTCTTGAACCCTTCAACTTCATCCCAAAACGCCCCCGCCTCACCTACTCTTCGTGTTCATCATCGTCATCGTCTCCGCCGTCCTCCCTCCGAGCAAAACCCCTTCCTCAGAAGAGCAACTTTGCTCGCCAGAGAAGGCAGAAGCTCAGCGAGAAGACTCGCTGCCTCCAGAAGTTGATGCCATGGGACAAGAAGATGGATCAGGCCACACTTTTCGAACAAGCCTACAGCTATGTTAAGTTCTTGCAGGTTCAGGTCTCCGTTCTTCAATCCATGCCCTACCACGCACCACCGTCACCCTCCTTCAACAATGGCGGCGGCTGTGTGTTCGGGTTCGGCGACTTGGAGAGGCTGAGCAGGAACCAGTTGCTGCAGGTGCTGGTGAACTCTCCGGTGGCGCAGACGGTGATGTCGTCGAAGGGTTTGTGCGTCTTCTCAGTGGAGCAGTTAGGGTTGCTGACGAAACTCTCGGAGCGGAGGCTTCTCCTTCAGAATATGAACGCCAACATGAACATGGTGTCTGATTCAAAACCTTTCTTCAACTAA 684 0.5365 MEPYSIDPMFSGMSLQSLLNLNPSLLSFLTDHPPQPQLPNHLTLHPTLEPFNFIPKRPRLTYSSCSSSSSSPPSSLRAKPLPQKSNFARQRRQKLSEKTRCLQKLMPWDKKMDQATLFEQAYSYVKFLQVQVSVLQSMPYHAPPSPSFNNGGGCVFGFGDLERLSRNQLLQVLVNSPVAQTVMSSKGLCVFSVEQLGLLTKLSERRLLLQNMNANMNMVSDSKPFFN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02179 227 MobiDBLite consensus disorder prediction 63 89 - -
Arst8g02179 227 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 85 202 IPR045843 GO:0003700|GO:0006355
Arst8g02179 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 128 IPR011598 GO:0046983
Arst8g02179 227 SMART finulus 85 134 IPR011598 GO:0046983
Arst8g02179 227 Gene3D - 82 141 IPR036638 GO:0046983
Arst8g02179 227 MobiDBLite consensus disorder prediction 63 96 - -
Arst8g02179 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 141 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02179 Arst-Chr8 30527990 30528673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02179 91 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 46.018 4.12e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02179 - - aprc:113855910 189.889