Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02160 ATGGAGGAACCCATTTGTCCAATCGATTCCAGTTGCCAAACTCAAGTCTCTGCTCTTCTCTCTCCTCCCTCCACTCTTCAACTTCAGGAATATTATAATACCCTTTTGTCTGCAAGGCACTACAGTTCCATCACTGTCAAACAAGATGCTAACTCTTAATTTACTTCTGTATTTATCTTGGTCTTGCTTGTTTAGGTTTATTAGGACTTTTTGCAGATTGATTGTTTTGTATGTAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAGCTTCAAATTGGAAGGAGGCTTTACCTCCAGGGATTAAGGGATTCTGAGAGTCATGGATGTGATGTCGGAAGCTCTTCGAGCTTGTCAAAAAACTTCCATGAGATGGATTCATCATCTGAAGATGAGGATCAGGGAACTCATCAATGTGGTTCCGGCAGTTCCAAAGATAAAATTCCTCTTCCTGAAGGTGTTGTGGAATCTTTAATGAATGGCCAACTGAATTTGCCTTTCTCTAAGGAGTTCTCGTTGCCGCCGGCGGTTCCATGCCTGGGCGGCTGTGGAGAAGCTTACTATTGCAGCACATCATGTGCAGAGGCTGACTGGGAATCTTCGCATTCTTTACTCTGCACTGGCGAGAGGTCTGATCCCGCTCATAGGGAGGCACTTCTTAAATTCAATAAACATGCTAATGAAACAAATGATATATTCATCCTTGCCGCAAAGGCTATTTGTTTTACCATATTAAGATACCGCAAGTTAAAAGCAAACTGTCATGAAGGGAAAATGAAATATGATACTTCTGGTGATTCAAACAGCTATAATGCCTCTCTTCTTTTGGAAGCTTGGAGGCCTATATCAATGGGACACAAGAGAAGGTGGTGGGATTGTGTTGCATTGCCAGATGATATTGATTCTTCAGATGAAGATTCGTTCAGGATGCAATTAAAAGAATTGGCATTCAAGTCTCTCCAACTTCTTAAGAAAGCTATATTTGACAAAGAGTGTGAGCCATTATTCTCCCTTGATATCTATGGACACATCATTGGCATGTTCGAACAGAATAATCTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGAAAAATCCTAATAAGGAAGAAGCTGAGAAAATTACACAACCAATTTTAGATGCTCTTGGTGAAGACTATTCTGTTTGTTGCCAAGGAACTGCTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTAGTCCTAATGCCAAAGCCTTCAAGAGAGACGAGGATAGGGATGGCCAAGCAACCATAATCGCAGTAAGGCCGATTCGAAAAGGAGAAGAGATAACCATCTCATATGTTGATGAAGACCTTCCTTTTGAAGAGAGACAAGCATCCCTTGCAGACTATGGTTTTAGATGCAGGTGTCCAAAATGCATTGAAGAAGAGCCATAA 1440 0.409 MEEPICPIDSSCQTQVSALLSPPSTLQLQEYYNTLLSARHYSSITVKQDANSXFTSVFILVLLVXVYXDFLQIDCFVCSFCFRFIGSIELQIGRRLYLQGLRDSESHGCDVGSSSSLSKNFHEMDSSSEDEDQGTHQCGSGSSKDKIPLPEGVVESLMNGQLNLPFSKEFSLPPAVPCLGGCGEAYYCSTSCAEADWESSHSLLCTGERSDPAHREALLKFNKHANETNDIFILAAKAICFTILRYRKLKANCHEGKMKYDTSGDSNSYNASLLLEAWRPISMGHKRRWWDCVALPDDIDSSDEDSFRMQLKELAFKSLQLLKKAIFDKECEPLFSLDIYGHIIGMFEQNNLDLVVASPVEDYFLYIDDLKNPNKEEAEKITQPILDALGEDYSVCCQGTAFFPLQSCMNHSCSPNAKAFKRDEDRDGQATIIAVRPIRKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEEP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02160 479 Pfam MYND finger 177 205 IPR002893 -
Arst8g02160 479 ProSiteProfiles SET domain profile. 265 449 IPR001214 GO:0005515
Arst8g02160 479 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 478 IPR044237 GO:0008168
Arst8g02160 479 Pfam SET domain 385 448 IPR001214 GO:0005515
Arst8g02160 479 SUPERFAMILY SET domain 340 474 IPR046341 -
Arst8g02160 479 Gene3D SET domain 370 478 IPR046341 -
Arst8g02160 479 Gene3D - 123 210 - -
Arst8g02160 479 MobiDBLite consensus disorder prediction 109 147 - -
Arst8g02160 479 CDD SET_SMYD 397 474 - -
Arst8g02160 479 SUPERFAMILY HIT/MYND zinc finger-like 180 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02160 Arst-Chr8 30377134 30381107 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst8g02160 SET 6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02160 - - gmx:100803651 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02160 8 30377134 30381107 Arst8g02160 8 30377134 30381107 ECH