Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02155 ATGGACGACATAGATCACTCTTCTTCTTCTTCTTCTTCTCAACATGTTTCTGCAAACTCTACAGAACAAGTGTCCAATCGAGCTTCCAAGGTTGAATTTTCGGAGGATGAGAAAACTCTTATTTCCAGGATGTATAAACTTGTTGGGGACAGGTGGTCCTTAATTGCCGGAAGAATTCCCGGAAGAACAGCTGATGAAATAGAGAAGTATTGGACTTCAAGATACTCATCAAGAAACGAATGA 243 0.4033 MDDIDHSSSSSSSQHVSANSTEQVSNRASKVEFSEDEKTLISRMYKLVGDRWSLIAGRIPGRTADEIEKYWTSRYSSRNE 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02155 80 Pfam Myb-like DNA-binding domain 30 72 IPR001005 -
Arst8g02155 80 CDD SANT 32 71 IPR001005 -
Arst8g02155 80 MobiDBLite consensus disorder prediction 7 28 - -
Arst8g02155 80 FunFam MYB-like transcription factor 32 74 - -
Arst8g02155 80 SMART sant 29 77 IPR001005 -
Arst8g02155 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 26 78 - -
Arst8g02155 80 MobiDBLite consensus disorder prediction 1 34 - -
Arst8g02155 80 Gene3D - 32 80 - -
Arst8g02155 80 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 79 IPR017930 -
Arst8g02155 80 ProSiteProfiles Myb-like domain profile. 25 75 IPR001005 -
Arst8g02155 80 SUPERFAMILY Homeodomain-like 31 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02155 Arst-Chr8 30342715 30344155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02155 24 78 MYB Transcription Factor Family AT5G14750 43.636 1.95e-14 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst8g02155 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02155 - - adu:127744146 150.214