Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02154 ATGGACGACATAGATCACTCTTCTTCTTCTTCTTCTTCTCAACATGTTTCTGCAAACTCTACAGAACAAGTGTCCAATCGAGCTTCCAAGGTTGAATTTTCGGAGGATGAGAAAACTCTTATTTCCAGGATGTATAAACTTGTTGGGGACAGCAGGTGGTCCTTAATTGCCGGAAGAATTCCCGGAAGAACAGCTGATGAAATAGAGAAGTATTGGACTTCAAGATACTCATCAAGAAACGAATGA 246 0.4065 MDDIDHSSSSSSSQHVSANSTEQVSNRASKVEFSEDEKTLISRMYKLVGDSRWSLIAGRIPGRTADEIEKYWTSRYSSRNE 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02154 81 ProSiteProfiles Myb-like domain profile. 25 76 IPR001005 -
Arst8g02154 81 CDD SANT 32 72 IPR001005 -
Arst8g02154 81 FunFam MYB-like transcription factor 32 75 - -
Arst8g02154 81 MobiDBLite consensus disorder prediction 7 28 - -
Arst8g02154 81 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 80 IPR017930 -
Arst8g02154 81 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 26 79 - -
Arst8g02154 81 SMART sant 29 78 IPR001005 -
Arst8g02154 81 Gene3D - 32 79 - -
Arst8g02154 81 Pfam Myb-like DNA-binding domain 30 73 IPR001005 -
Arst8g02154 81 MobiDBLite consensus disorder prediction 1 34 - -
Arst8g02154 81 SUPERFAMILY Homeodomain-like 29 76 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02154 Arst-Chr8 30342715 30344323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02154 24 79 MYB Transcription Factor Family AT5G14750 42.857 1.11e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst8g02154 Myb_DNA-binding 2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02154 - - adu:127744146 156.377