Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02152 ATGAACGACCTTCTTACTGATTCGTTTGCTGATGAAGGTAATCATGGTCAGCCTTCTAGACAAGGTGATATTGAAATGGGAATGCAGGTTCAGAGAAGCAACTCTGATCTGGGAATGGAAGCTTTTAATAAGCAGATCCATGAGGTCGACAAACAAATCGATAAGCTCTCTGGGCTACTTCAAAAGCTAAAGGAAGCTAATGAAGAATCAAAAGCCGTTACAAAAGCATCTGCTATGAAAGCTATCAAGAAGAGAATGGAGAAGGATATTGATGAAGTTGGAAAGATTGCACATGGTGTCAAAACAAAAATAGAAGCTATAAACAGAGATAACTTAAACAACAGAAAAAAGCCAGGTTGTGAGAAGGGAACGGGTATTGATAGAGCGAGGATGAATATGACAAATGCCTTAACTAAAAGGTTCAAGGATCTAATGACAGAGTTTCAGACTCTTAGACAAAGAATACAAGATGAATATCGTGAGGTTGTTGAGAGAAGAGTTATTACAGTCACTGGAACTAGGCCAGATGATGAGACAATTGATCACCTGATTGAAACTGGAAATAGTGAACAAATCTTCCAGAAGGCAATTTTAGAAGCAGGACGAGGACAGGTTGTAAGCACAGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAAATTGAGAAAAAGCTTCTTGATTTGCACCAGATTTATCTCGACATGGCAGTCTTGGTTGATGCTCAGGGAGAGATTTTAGACAACATCGAAAGCCAGGTGACAAACGCAACTGATCATGTTAGATTGGGAAACGATGCTCTTCAAACTGCAAAGATTTATCAAAAGAGGTCAAGAAAATGCATGATCATTGCTGTTATACTGGTCTTGATCATCGCCGCCATTATCGTGATCCCCATTTTGAAAACAAGGAAGAAGTGA 921 0.3931 MNDLLTDSFADEGNHGQPSRQGDIEMGMQVQRSNSDLGMEAFNKQIHEVDKQIDKLSGLLQKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKTKIEAINRDNLNNRKKPGCEKGTGIDRARMNMTNALTKRFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQKAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVTNATDHVRLGNDALQTAKIYQKRSRKCMIIAVILVLIIAAIIVIPILKTRKK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02152 306 CDD SynN 39 196 IPR006011 GO:0016020
Arst8g02152 306 FunFam Syntaxin 132 34 163 - -
Arst8g02152 306 Pfam SNARE domain 245 297 IPR000727 -
Arst8g02152 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
Arst8g02152 306 SUPERFAMILY t-snare proteins 37 264 IPR010989 GO:0016020|GO:0016192
Arst8g02152 306 SMART tSNARE_6 204 271 IPR000727 -
Arst8g02152 306 Gene3D - 34 163 - -
Arst8g02152 306 PANTHER SYNTAXIN 36 289 IPR045242 -
Arst8g02152 306 SMART SynN_4 34 160 IPR006011 GO:0016020
Arst8g02152 306 Coils Coil 46 76 - -
Arst8g02152 306 CDD SNARE_syntaxin1-like 208 270 - -
Arst8g02152 306 Pfam Syntaxin 42 244 IPR006011 GO:0016020
Arst8g02152 306 MobiDBLite consensus disorder prediction 1 25 - -
Arst8g02152 306 FunFam Syntaxin 132 202 302 - -
Arst8g02152 306 Gene3D - 203 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02152 Arst-Chr8 30332523 30338134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02152 1 302 SNARE and Associated Proteins AT3G03800 59.934 3.22e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02152 K08486 - gmx:100800991 488.419