Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02146 ATGCCAGCCGGTATTATGATTCCGGCGAGAAACATGATGTCATCGATGATCGGAAGGACCAACAATGGAAACAGCCTTGGGGGTGGGTTTGGATCTTCGTCTTCCTCTGGACTCTCTCTTGGCCAGATTGAGAACCACAACAAGGGTTCGGAGACACATCACCAAAGATCCATGGATATGTTTCAAGCCAACATGATGGAAGGTGGTCAATTGCACCACCACGGCCTCGAGATGGGTCAGAACACGCCGGAGAGCGACGTCCCTAGAATCCGAGAGGACGAGTTCGACAGCGCCACCAAGTCCGGCAGCGAGAACCAAGAAGGTGGCGCCTCCGGCGAGGACCAAGACCCCCGCCCTAACAAGAAGAAGCGTTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCATTCTTTAAGGAGTGTCCGCACCCAGATGACAAGCAAAGGAAGGAACTGAGCCGTGAGTTAGGGTTAGAGCCATTGCAAGTGAAGTTTTGGTTCCAGAACAAGCGCACTCAAATGAAGACGCAACATGAGAGGCACGAGAACACGCAGCTAAGGACAGAGAACGAGAAGCTGAGAGCGGATAACATGAGGTATAGGGAGGCTCTTAGCAATGCCTCTTGCCCCAACTGTGGTGGACCAACCGCCATTGGAGAAATGTCTTTTGATGAGCATCACTTGAGGCTTGAAAATGCCAGGCTAAGGGAAGAGATTGATCGGATTTCTGCCATTGCTGCAAAGTACGTGGGGAAGCCAGTGGTGAACTACCCACTCCTTTCATCATCCTCAGTTCCAGCACGTCCGCTAGAACTCGGCATTGGTGGTTTCGGTGGGCAAGCGGGCATGGGTGGTGGCGACATGTACGGAGGAGGTGGAGCCGGAGATCTTCTGAGGCCAATAAGTGGGCCCACTGAAGCAGACAAGCCAATGATAATAGAGCTGGCCGTAGCGGCCATGGAGGAGCTGATTGGGATGGCACAGATGGGTGAGCCTCTTTGGTTGACCACACTTGATGGTGCCACCACTGTGCTTAACGAGGATGAATATGTCAGATCTTTCCCCCGTGGAATTGGACCCAAACCTAATGGATTCAAATGTGAGGCTTCACGAGAAACCGCTGTTGTCATCATGAACCATGTTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCGACAGTTTTCTCTGGAATAGTTTCAAGAGCGGTGACTCTAGAAGTTCTATCAACAGGGGTAGCAGGAAACTATAACGGTGCCTTGCAAGTGATGACGGCGGAGTTACAAGTGCCTTCGCCGCTGGTGCCAACAAGAGAGAGCTATTTCGTAAGGTATTGTAAGCAGCACGCGGACGGCACGTGGGCAGTGGTGGACGTGTCGTTGGACAATTTGCGGCCTAGTCCTTCGGCCAGGTGCAGGAGAAGGCCTTCTGGTTGCTTGATTCAAGAAATGCCCAACGGCTACTCCAAGGTCATATGGGTTGAGCACGTTGAAGTTGATGACAGAGGCGTTCATAGTCTCTATAAGCAGCTTGTTAGCTCTGGTCACGCCTTCGGTGCCAAACGCTGGATTGCAACCTTGGATCGCCAGTGTGAAAGGCTCGCTAGTGCCATGGCAACTAACATTCCCACCGTTGATGTTGGAGTGATAACAAATCAAGAAGGGAGGAAGAGCATGCTGAAACTGGCGGAGAGAATGGTGATAAGCTTTTGTGCTGGAGTGAGTGCTTCAACGGCGCACACGTGGACAACGCTTTCTGGAACGGGTGCGGATGACGTCAGAGTCATGACACGTAAGAGTGTGGATGACCCTGGAAGGCCACCTGGCATTGTTCTCAGTGCTGCTACTTCTTTCTGGCTCCCAGTACCTCCTAAAAGGGTCTTTGAATTCCTCCGTGACGAGAATTCCAGAAGCGAGTGGGACATCCTTTCCAATGGTGGAGTTGTTCAAGAAATGGCACATATTGCTAATGGAAGAGATACTGGAAATTGTGTCTCTCTCCTTCGAGTCAACAGTGCGAATTCAAGCCAGAGTAACATGTTGATATTGCAAGAGAGTTGCACGGATTCAACTGGGTCATTTGTGATCTATGCCCCAGTGGACATTGTTGCCATGAATGTGGTTCTGAATGGAGGAGATCCTGACTATGTGGCGCTTCTTCCTTCTGGCTTCGCTATTCTTCCGGACGGGACAACGCCGGACGGAGGCAGCGAAGCCGGTGGACATGGTGGTTCTCTCTTAACTGTTGCGTTTCAAATACTGGTTGATTCCGTTCCAACCGCCAAGCTGTCTCTTGGTTCTGTTGCCACTGTTAACAACCTTATTGCTTGCACTGTTGAGAGAATTAAGGCTTCTTTATCTGGAGAAGCTCCTTCATAA 2388 0.5101 MPAGIMIPARNMMSSMIGRTNNGNSLGGGFGSSSSSGLSLGQIENHNKGSETHHQRSMDMFQANMMEGGQLHHHGLEMGQNTPESDVPRIREDEFDSATKSGSENQEGGASGEDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSSSSVPARPLELGIGGFGGQAGMGGGDMYGGGGAGDLLRPISGPTEADKPMIIELAVAAMEELIGMAQMGEPLWLTTLDGATTVLNEDEYVRSFPRGIGPKPNGFKCEASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAVTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHSLYKQLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTVDVGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTPDGGSEAGGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEAPS 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02146 795 FunFam Homeobox-leucine zipper protein HDG1 109 195 - -
Arst8g02146 795 Gene3D - 109 196 - -
Arst8g02146 795 SUPERFAMILY Bet v1-like 307 538 - -
Arst8g02146 795 MobiDBLite consensus disorder prediction 95 130 - -
Arst8g02146 795 SUPERFAMILY Homeodomain-like 111 179 IPR009057 -
Arst8g02146 795 CDD START_ArGLABRA2_like 311 535 - -
Arst8g02146 795 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981|GO:0006355
Arst8g02146 795 MobiDBLite consensus disorder prediction 18 54 - -
Arst8g02146 795 FunFam Homeobox-leucine zipper protein GLABRA 2 316 535 - -
Arst8g02146 795 Pfam Homeodomain 122 177 IPR001356 GO:0003677
Arst8g02146 795 MobiDBLite consensus disorder prediction 18 46 - -
Arst8g02146 795 CDD homeodomain 122 180 IPR001356 GO:0003677
Arst8g02146 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 120 789 IPR042160 -
Arst8g02146 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 120 789 IPR042160 -
Arst8g02146 795 SMART HOX_1 120 183 IPR001356 GO:0003677
Arst8g02146 795 Gene3D - 361 533 IPR023393 -
Arst8g02146 795 ProSiteProfiles START domain profile. 307 539 IPR002913 GO:0008289
Arst8g02146 795 SMART START_1 316 536 IPR002913 GO:0008289
Arst8g02146 795 Coils Coil 185 205 - -
Arst8g02146 795 Pfam START domain 317 536 IPR002913 GO:0008289
Arst8g02146 795 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
Arst8g02146 795 SUPERFAMILY Bet v1-like 555 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02146 Arst-Chr8 30262286 30269091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02146 60 792 Homeobox Transcription Factor Family AT1G05230 79.161 0.0 1175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst8g02146 START 3.2e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02146 K09338 - gmx:100809556 1358.97