Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02142 ATGGAGGTGCACTTGCTTACAAGGCATGGCAGCATGGTGATGGTGTTGTTCCTCTTGGTTTTCTGCTCCTGGATTCCAATAGAAGTGGTGGGGAGGACAGGAGCTACCATTGGAAATGCTACCGTTTCTTCTTCGAGTCCAAGAGTTTTGAAAATTGGGGTGCTGTTTACTTTGAATTCTGTCATTGGAAGATCAGCTAAAGCTGGTGTATTGGCTGCTATTGATGATGTTAATGCTAACAAAAGCATCCTTCGTTCGACTAAACTTGAAATTATGTTGCATGATACAAATTGCAGCGGGTTTCTTGGAACCGTGGAAGCTCTGCAGTTGATGGAGAATGAAGTGGTTGCTGCAATTGGTCCACAATCATCTGGAATAGCTCATGTCATCTCTCATGTGGCTAATGAACTCCATGTGCCTCTTCTTTCATTCGCGACAGACCCTGCTTTAGTGTCACTCCAGTATCCATATTTCATCCGCACCACGCCAGATGACTATTTCCAGATGTATGCAATTGCAGACTTGGTTGATCACTATAGGTGGAGGGAGGTAATAGCTATCTTTGTAGATGATGACAATGGAAGAAATGGAATTTCAGTGTTGGGCGATGCGCTTGCTAAGAAACGTGCCAAGATATCTTACAAGGCCGCATTCCCTCCTGGAGCCCCCATGAGTAATATCAGTGACTTGTTGAATCAGGTGAACCTGATGGAATCACGTGTTTATGTGCTGCATGTTAATCCTGATTCTGGCTTGTCAATTTTTGCACTTGCCAAGAAGATTGGGATGATGACTAGTGGCTATGTGTGGATTGCAACAGATTGGCTTCCTTCTGTGCTGGATTCTATGGAGCAGGTTAACACTGACACCCTTAATATACTACAAGGAGTTGTTGCTCTGCGGCATCACACGCCTGACACTGATCTTAAGAAGAGTTTCATCTCAAATCTGAAGAGCAGAAAGAACAATGAGACTGCAGGCTTCAATTCTTATGCATTCTATGCATATGATTCTGTTTGGTTAGCAGCGCGTGCTCTGGATACTTTTCTCAATGAAGGTGGAAACATATCTTTCTCCTCGGATCCTAAGTTGCAAGACACAAATTCAAGTATGTTGCATTTTTCAGCACTCCGTGTGTTTGATGGCGGCGATAAGTTTCTTCAGACAATTCTGAAAACAAACTTCACTGGTGTGAGTGGCCCAGTTCAGTTTGGTATGGATAAGAATTTGATTCATCCAGCTTATGATATCATGAATATCGGCGGGTTTGGAACTCGTAGGATTGGTTATTGGTCTAATTATTCTGGTCTCTCAGTTATAGCTCCTGAAATTTTGTATCTGAAACCACCTAACGCTTCGGCAAGCAACCAACACCTATATAGTGTTATATGGCCTGGAGAAACAACAGTTACACCAAGGGGATGGGTATTCCCAAACAATGGGAAACCATTGAGAATCGCAGTGCCTAATCGAGTAAGCTATTTGGAGTTTGTTGGTAAGGACAAGAACCCTCCTGGGGTAAAAGGCTATTGCATTGATGTCTTTGAAGCAGCCATAAAGTTGTTGCCTTATCCTGTTCCAACAGAATATATATTATATGGTCATGGTGATAGAAATCCCAGCTATGATGACCTTGCATATCAGGTTGCACAAAATAACTTTGATGCAGTTGTTGGAGATATTACAATTGTCACCAACAGGACAAGGATTGTGGATTTTACTCAGCCTTACATGGAATCAGGGCTGGTGGTTGTTGTTCCTGTTAAGGAAATCAAGTCAAGCCCTTGGTCCTTTCTAAAGCCATTCACCACTAAAATGTGGTTAGTTACTGGTGCATTCTTTCTCTTCGTGGGAGCCGTCGTGTGGATTCTTGAGCACCGGCACAATGAAGAATTCCGCGGTCCTCCAAGGAAACAAATTATAACAGTGTGTTGGTTTAGTTTCTCAACAATGTTTTTCTCACACAGAGAGAACACTGTGAGTGCACTCGGTCGATTGGTTCTACTCATATGGCTTTGGGTGGTTTTAATCATCAATTCAAGCTACACAGCTAGCTTAACATCCATCCTCACAGTGCAGCAACTTTCATCACAGATTGAAGGAATTGACAGCTTGATCTCAGGTACTCAACCAATTGGAATCCAAGAAGGATCTTTTGCGAAAAAGTATCTGACAGATGAACTCAACATAGCACCATCTAGGATAGTTACACTGAAAAATATGGAGGCATATGTTGATGCTCTTGAACGCGGACCAAGGAATGGAGGGGTTGTGGCCATTGTTGATGAGCTTCCTTATATTCAGCTCTTCATGTCCAATACCAACTGTAAGTTCAGAACAGTTGGACAGGAGTTCACTAAAAGTGGTTGGGGATTTGCATTCCAAAGGGATTCACCGCTTGCTGTTGATTTGTCAACTGCCATCCTTCAACTTTCGGAGAACGGGGAACTGCAAAAGATCCATGACAAATGGCTTTTGAAGCGAGACTGCACTGCGCAACTCAATGTTGAAGACTCAAATAAACTGTCTCTGAGTAGCTTCTGGGGCCTCTTTCTCATATGTGGCATTGCATGCTTCCTTTCTTTGGTTGTATTCTTTGTTAGAGTGTTCTGTCAATACACCAGATTTAGCCCTGAGCCTGAACAAGTTGATGTGGAAATTCAACCAAGGCCTCCTAGAAGGAACCTCAAAAGTACTAGTTTCAAGGACTTGATGGAATTTGTGGATACCAAAGAAAAAGAAATCAAAGAGAGACTTAGGAAAAGTAAAAGGAGAAGAAGCCAGAGTCTAGATGAGCAATCTAGTTCATCACCCTCCTAA 2820 0.4266 MEVHLLTRHGSMVMVLFLLVFCSWIPIEVVGRTGATIGNATVSSSSPRVLKIGVLFTLNSVIGRSAKAGVLAAIDDVNANKSILRSTKLEIMLHDTNCSGFLGTVEALQLMENEVVAAIGPQSSGIAHVISHVANELHVPLLSFATDPALVSLQYPYFIRTTPDDYFQMYAIADLVDHYRWREVIAIFVDDDNGRNGISVLGDALAKKRAKISYKAAFPPGAPMSNISDLLNQVNLMESRVYVLHVNPDSGLSIFALAKKIGMMTSGYVWIATDWLPSVLDSMEQVNTDTLNILQGVVALRHHTPDTDLKKSFISNLKSRKNNETAGFNSYAFYAYDSVWLAARALDTFLNEGGNISFSSDPKLQDTNSSMLHFSALRVFDGGDKFLQTILKTNFTGVSGPVQFGMDKNLIHPAYDIMNIGGFGTRRIGYWSNYSGLSVIAPEILYLKPPNASASNQHLYSVIWPGETTVTPRGWVFPNNGKPLRIAVPNRVSYLEFVGKDKNPPGVKGYCIDVFEAAIKLLPYPVPTEYILYGHGDRNPSYDDLAYQVAQNNFDAVVGDITIVTNRTRIVDFTQPYMESGLVVVVPVKEIKSSPWSFLKPFTTKMWLVTGAFFLFVGAVVWILEHRHNEEFRGPPRKQIITVCWFSFSTMFFSHRENTVSALGRLVLLIWLWVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISGTQPIGIQEGSFAKKYLTDELNIAPSRIVTLKNMEAYVDALERGPRNGGVVAIVDELPYIQLFMSNTNCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGELQKIHDKWLLKRDCTAQLNVEDSNKLSLSSFWGLFLICGIACFLSLVVFFVRVFCQYTRFSPEPEQVDVEIQPRPPRRNLKSTSFKDLMEFVDTKEKEIKERLRKSKRRRSQSLDEQSSSSPS 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02142 939 SUPERFAMILY Periplasmic binding protein-like I 44 476 IPR028082 -
Arst8g02142 939 FunFam Glutamate receptor 595 725 - -
Arst8g02142 939 Gene3D - 72 412 - -
Arst8g02142 939 MobiDBLite consensus disorder prediction 918 939 - -
Arst8g02142 939 Gene3D - 596 719 - -
Arst8g02142 939 Pfam Ligand-gated ion channel 827 858 IPR001320 GO:0015276|GO:0016020
Arst8g02142 939 Gene3D - 720 828 - -
Arst8g02142 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 51 908 IPR015683 -
Arst8g02142 939 Pfam Bacterial extracellular solute-binding proteins, family 3 504 826 IPR001638 -
Arst8g02142 939 FunFam Glutamate receptor 721 829 - -
Arst8g02142 939 CDD PBP1_GABAb_receptor_plant 51 439 IPR044440 -
Arst8g02142 939 PIRSF IGluLR_plant 9 939 IPR017103 -
Arst8g02142 939 Gene3D - 164 437 - -
Arst8g02142 939 Gene3D - 479 595 - -
Arst8g02142 939 FunFam Glutamate receptor 164 332 - -
Arst8g02142 939 FunFam Glutamate receptor 479 595 - -
Arst8g02142 939 PIRSF IGluLR_plant 9 939 IPR017103 -
Arst8g02142 939 SMART GluR_14 485 827 IPR001320 GO:0015276|GO:0016020
Arst8g02142 939 CDD GluR_Plant 482 825 - -
Arst8g02142 939 SUPERFAMILY Periplasmic binding protein-like II 459 826 - -
Arst8g02142 939 Pfam Receptor family ligand binding region 68 420 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02142 Arst-Chr8 30228975 30233795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02142 47 792 Ion Channels AT1G05200 68.675 0.0 1101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02142 K05387 - gmx:100799912 1403.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02142 8 30228975 30233795 Arst8g02142 8 30228975 30233795 ECH
Arst3g01504 3 13809698 13814586 Arst8g02142 8 30228975 30233795 PCT