Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02141 ATGAAGTCGTTTGTTGTTTCCCACCTTGTGATTTGGACCATCTTTTGTGGTGGTATTTTCTGCAGTAGGCCTGCAAGTGTGAACATTGGTGCAGTCTTCACCTTCGATTCGGTCATAGGTAGAGCTGCAAAGGTGGCCATGAAAATGGCCGTTGATGATGTCAATGCTGACCCTAGAGTCCTCAATGGCACCCACCTCAACTTGATAATGAAGGATGCTGCCTGCAGTGTCTTTCTGGGAGCTATTGGAGCTTTTCAGGCACTCGAGGAAGGGATCGTAGCAATGGTTGGTCCACAGTCGTCTTCTATAGCTCATATGGTATCTCAAATTGCTGATGCTCTCCATGTGCCTCTTGTCTCATATGGTGCCACTGATCCTACCCTGTCCTCCCTTCAGTTCCCTTACTTTTTTCGTACTATACAAAGCGACTTGGAGCAGATGATTGCGGTAGCTGATCTAATTGAATTCAATGAATGGAAGGAGGTCATTGCTGTATACTTGGATGATGATTATGGAAGAAATGGAATGTCGGCTTTGAGGGATGAACTTGAAAATAGGAGATTGAAAATTGCTCATAAGCTACCTTTGAGTATTCAGTTTGATCCAAATGAAATCACCACTTTGCTGAACCAATCCAAATTGTTTGGTCCTCGTGTGTATGTTGTTCATATCAACCTGGATCCAAAACTGAGATTTTTCAACATTGCCAACAAACTTAAAATGATGACCAAAGACTATGTTTGGCTAGTCACTGATTGGCTCTTTGCTACCTTAGATTCTTTCTCCACAGTGAATCAGACCTCTCTCAGTGTTCTCCAAGGGGTTGTTGGTTTTCGTCAGCATATTCCAGATTCCCGAAAGAAGAGAGGTTTCGTTTCAAAATGGAGAAATGCACATAAAGGTATGCCAAATGGTAGTTTGAATGCCTATGGATACTATGCTTATGATACAATATGGGCAGTTGCGCGATCAATTGACAGATTCATTAGATTGCATAATAATATTACCTTTGTAGTTAATCATGAGAATAAGCCATCTCACACACAAGGAAATGATCTTCAGCTTGACAAGCTCAAAATCCTTGCTAGTGGATCTGATCTGGGCAGTATATTATTACAGTCAAATTTTACTGGTGTGAGTGGTCGAGTTCAGTTTAATGCAAACAGGAATATCATAAGTGGTGGTTATGATGTTATAAATATCAATCAGAGTGCAATGACTACGGTTGGTTATTGGTCTAATTGCTCAGGATTTTCGGTCATCCCCGCTGAAAATCTTAAGACTAAGAAATGTAAAAGGTTAACTCAAGATCATAAGCTTGGCAATATTACTTGGCCTGGTGGAGGGACAGAAAGACCGCGCGGCTGGGTGATTGCTGATAATGGAAGACCACTGAGAATTGGAGTACCACGTAGAGCAAGTTTTGTTGAATTTGTGACTGTGAAGGATCATCAAATTCTAGGGTACTGCATTGATGTCTTCAACAAGACCCTGGAATTTATTCCATATGATGTTCCTTACCGTTTCATCCCTGTTGGGAATGGTAAATCAAATCCAAGCTATGATGAACTCGTGAAAAATGTTGCTGACAGTGTATATGATGCAGTTGTCGGCGACATTGCAATTGTGACGAACCGTACACAATATGTGGATTTTTCTCAGCCTTATGCAACAACTGGCCTTGTTATAGTGGCTCCTGTCGACAATGCAAGATCAAATGCTTGGGTGTTTCTCCAACCATTCACAGCAGATATGTGGTGTGCTACGGCTGCTTCATTCGTGATGATTGGAGTGGTTATATGGATTCTTGAGCACCGAGTCAATGATGACTTCCGTGGTCCTCCTAAGAGACAACTGGTGACAGCGTTTATGTTCAGCCTCTCAACACTGTTTAAGACAAACCAGGAACGGACGATAAGCTCGCTATCCAAAATGGTGATGATAGTCTGGCTTTTCCTATTGATGGTGATCACTGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGCAGCTCTCATCGCCCATCACAGGAATCGATAGCTTGATTGCGAGCAATTGGCCCATTGGATACCAAGTAGGATCTTTCGCTTACAGCTATCTTACGGATAGTCTTTATATATCAAAATCAAGACTTGTTCAACTAGGCTCTCCCGAGGAATATGCTAAAGCTCTGAAGAAGGGGCCGTCTAATGGAGGCGTGGCGGCTATCATCGATGAGCTTCCTTACGTGGAGTTATTTCTGTCAAAGGAAACTGGGTTCGGTATCATTGGACAGCCATTTACCAAAAGCAGTTGGGGATTTGCTTTCCAAAAAGAGTCTCCTCTCGCCCTCGACATGTCCACGGCTATTCTAAAACTCGCCGAGAGCGGAGAGCTCCAGAAGATACATGACAAGTGGCTCTGCAAGATGGGTTGCTCTGAAAAAACAACAAGCAACTCCAAGCCTGACCAACTTCACTTGATTAGTTTTTGGGGTCTGTATCTGTCATGTGGTGTTGTCACACTCGCCTCGCTTTTGGTGTTTCTTCTGCGAGCGATTCGCCAATACGCTCGCTTCAAACGACGGGAAAAGGACATTGCTGTCGCCTCATCGTCGGAACCATCAAAGACCAGCAGCCATTGTTCCCAGGTTCTCCTTAACTTCTTCAACTTCATTGATGAAAAAGAAGAGGCCATAAAGAAAATGTTCACTCAATGTGACAATCCTGAACCTCAAGTCAGATAA 2733 0.431 MKSFVVSHLVIWTIFCGGIFCSRPASVNIGAVFTFDSVIGRAAKVAMKMAVDDVNADPRVLNGTHLNLIMKDAACSVFLGAIGAFQALEEGIVAMVGPQSSSIAHMVSQIADALHVPLVSYGATDPTLSSLQFPYFFRTIQSDLEQMIAVADLIEFNEWKEVIAVYLDDDYGRNGMSALRDELENRRLKIAHKLPLSIQFDPNEITTLLNQSKLFGPRVYVVHINLDPKLRFFNIANKLKMMTKDYVWLVTDWLFATLDSFSTVNQTSLSVLQGVVGFRQHIPDSRKKRGFVSKWRNAHKGMPNGSLNAYGYYAYDTIWAVARSIDRFIRLHNNITFVVNHENKPSHTQGNDLQLDKLKILASGSDLGSILLQSNFTGVSGRVQFNANRNIISGGYDVININQSAMTTVGYWSNCSGFSVIPAENLKTKKCKRLTQDHKLGNITWPGGGTERPRGWVIADNGRPLRIGVPRRASFVEFVTVKDHQILGYCIDVFNKTLEFIPYDVPYRFIPVGNGKSNPSYDELVKNVADSVYDAVVGDIAIVTNRTQYVDFSQPYATTGLVIVAPVDNARSNAWVFLQPFTADMWCATAASFVMIGVVIWILEHRVNDDFRGPPKRQLVTAFMFSLSTLFKTNQERTISSLSKMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYSYLTDSLYISKSRLVQLGSPEEYAKALKKGPSNGGVAAIIDELPYVELFLSKETGFGIIGQPFTKSSWGFAFQKESPLALDMSTAILKLAESGELQKIHDKWLCKMGCSEKTTSNSKPDQLHLISFWGLYLSCGVVTLASLLVFLLRAIRQYARFKRREKDIAVASSSEPSKTSSHCSQVLLNFFNFIDEKEEAIKKMFTQCDNPEPQVR 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02141 910 Pfam Ligand-gated ion channel 804 835 IPR001320 GO:0015276|GO:0016020
Arst8g02141 910 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 864 IPR015683 -
Arst8g02141 910 FunFam Glutamate receptor 142 297 - -
Arst8g02141 910 CDD GluR_Plant 463 803 - -
Arst8g02141 910 SUPERFAMILY Periplasmic binding protein-like II 443 803 - -
Arst8g02141 910 SMART GluR_14 466 805 IPR001320 GO:0015276|GO:0016020
Arst8g02141 910 Gene3D - 575 706 - -
Arst8g02141 910 PIRSF IGluLR_plant 1 909 IPR017103 -
Arst8g02141 910 PIRSF IGluLR_plant 1 909 IPR017103 -
Arst8g02141 910 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 100 128 - -
Arst8g02141 910 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 314 326 - -
Arst8g02141 910 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 40 56 - -
Arst8g02141 910 FunFam Glutamate receptor 574 712 - -
Arst8g02141 910 SUPERFAMILY Periplasmic binding protein-like I 21 457 IPR028082 -
Arst8g02141 910 Pfam Receptor family ligand binding region 44 403 IPR001828 -
Arst8g02141 910 Gene3D - 142 417 - -
Arst8g02141 910 CDD PBP1_GABAb_receptor_plant 28 422 IPR044440 -
Arst8g02141 910 FunFam Glutamate receptor 460 574 - -
Arst8g02141 910 Gene3D - 758 810 - -
Arst8g02141 910 Gene3D - 45 393 - -
Arst8g02141 910 Pfam Bacterial extracellular solute-binding proteins, family 3 483 803 IPR001638 -
Arst8g02141 910 Gene3D - 457 574 - -
Arst8g02141 910 FunFam Glutamate receptor 700 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02141 Arst-Chr8 30213546 30218171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02141 21 904 Ion Channels AT2G32400 56.629 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02141 K05387 - gmx:100796389 1366.67