Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02111 ATGGAGTGGATTAGAGGCCAAATCATAGGCCAAGGCTCCTCAGCCACCGTATGCCTAGCTGGCACCACCACCTCTGCCGCCGTCTGTGCCGTCAAGTCAGCAGAGCTCTCACAATCACAACACCTCCAAAGAGAACAAAAAATATTGTCCTCACTCTCTTCACCACACATAGTAACCTACAAAGGCTTTGATATCACAAAAGAGAAAAGCAAGCTCATGTTCAACCTCTTCATGGAGTATATGCCCCATGGAACACTCTCTAGCCACGGTGGCCGCCTCCTGGAGCCAGCGATCGCACACTACACAAAGCAAGTTTTAAAGGGGCTAGAATACTTGCACTCAAGAGAGTTGGTGCATTGTGACATAAAGGGTAGTAACATCCTTGTTGGTGAAGGTAACTGTGTCAAAATTGCTGACTTCGGATTAGCAAAGAGCCTAAATGAGTCAGCCGGGGTGCCACTGGCTGGCACCCCGGCTTTCATGTCGCCGGAGGCGGCTCGGGGGGAGGAGCAGGGGTACCCTTGTGATGTTTGGGGAATTGGATGCACTGTGATTGAGATGGCCACTGGTAGTTCACCATGGCCTAAAGTTAAGGACCCTGTTTCAATGCTGTACCATGTTGGATATTCCGGTGAGGTTCCTGAGATTCCGGGGTTTCTTTCTGAAGAAGCAAAGGATTTCTTGGAGAAGTGTCTTAGGAGGAATCCAAGAGAAAGATGGAGTGCTAGCCAATTGCTGAATCATCCATTTCTTGGGGAATTCAGTTCCAAAGATGGTGATTGTGTTCTTGGGGAATCCAATAGTTCATCATGGTCTCCTACTAGTATTCTTGATCAAGGATTTTGGAATTCTGTGGAGGAATCAGAATGCCCCATTGCTGGGGATTTTGTTCAAACATGTTGTGTGCATTCCGCTTCTGATAGGATCAAGAAGCTGGCTTTGTGTTCTGGTGACCCCAATTGGAATTGGGAAAGTGAGAATTGGATCACAACTAGAGGGAATAACAATAACGAGAGTTCTTGTTCTTGCATTGGTGGATCAATGATAGCTTCAAATTCAGCTATTGATTGTTGGTGTGAGGTGGAGAAAAGTAATCATAATAATAATAATAATAATGACGATGATAATGTTATTAATAGTAATTGTAGAATTAATAGTTGTTTTTATGAGGATTTTAAATGTAGGGATGTTAGGGTTGTAGTAAATAGTGTCAATTTTCAGAAAATGCATCCTTTGACATTAGATATTTTATAG 1254 0.4378 MEWIRGQIIGQGSSATVCLAGTTTSAAVCAVKSAELSQSQHLQREQKILSSLSSPHIVTYKGFDITKEKSKLMFNLFMEYMPHGTLSSHGGRLLEPAIAHYTKQVLKGLEYLHSRELVHCDIKGSNILVGEGNCVKIADFGLAKSLNESAGVPLAGTPAFMSPEAARGEEQGYPCDVWGIGCTVIEMATGSSPWPKVKDPVSMLYHVGYSGEVPEIPGFLSEEAKDFLEKCLRRNPRERWSASQLLNHPFLGEFSSKDGDCVLGESNSSSWSPTSILDQGFWNSVEESECPIAGDFVQTCCVHSASDRIKKLALCSGDPNWNWESENWITTRGNNNNESSCSCIGGSMIASNSAIDCWCEVEKSNHNNNNNNDDDNVINSNCRINSCFYEDFKCRDVRVVVNSVNFQKMHPLTLDIL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02111 417 SUPERFAMILY Protein kinase-like (PK-like) 3 255 IPR011009 -
Arst8g02111 417 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02111 417 Pfam Protein kinase domain 6 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02111 417 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Arst8g02111 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Arst8g02111 417 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 342 - -
Arst8g02111 417 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02111 417 CDD STKc_MAPKKK 2 251 - -
Arst8g02111 417 Gene3D Transferase(Phosphotransferase) domain 1 2 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02111 Arst-Chr8 29817138 29818481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02111 3 352 MAP Kinase Kinase Kinase AT5G55090 48.925 4.23e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst8g02111 Pkinase 5.6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02111 K20716 - gmx:100797801 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02111 8 29817138 29818481 Arst4g00649 4 4770905 4772445 ECH
Arst8g02111 8 29817138 29818481 Arst8g02111 8 29817138 29818481 ECH
Arst8g02111 8 29817138 29818481 Arst3g01474 3 13282368 13283608 PCT