Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02110 ATGGATAACACCACTCTCACCACCACCACCACCGCCACCGCCACCAATTCACTTAAGCCCTTCCAAGTCAACCTCACCTGCTCCCTCCACCACCATGACAAGAGACCTCTCATTGATGAACACGACTTCTTCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCCCTCCTCCTCATCACCACCACCACAACACCATGAATTCTGATATCTTGGATTCCAAAGTAAACACTGGTCTGAATCTTCTTACTACCAACACGAGCAGCGATCAATCCGTTGTTGACGATGACATCTCACCGAATTCACACCAGAAAAGACCCGTCCCTGATCAGACGGTTGTTATTCTGGCGGAGCTGGAGCGAACGAAGGCGGAGAATCAACGGTTGAGAGAGAGGCTTGATCGTGTAACCGCGGAATACAAGGCCCTGCAGATGCAAGTGGTGGCTTTGATGCAACAACACAAGCCAGAGGAGGAGGAGGAGAAGAAGCAAGACGCAGCGCCAAGACAGTTCATGGATCTTGGATTGGCCACTAACGGTGCTGAGACGGGGGAGGAGGCTTCGCTTTCTTCGTCGGAGAGGTCGAAGTCTCCAGAGAGGAAGAATGGAAGCAGTGATGATCACGAAAAGAATAGCAGAGAGGATAGTCCCTTGGCTCCAAGAAATGTTGATCAAGCTGAAGCCACTATGAGAAAAGCTAGAGTCTCTGTTAGAGCTAGATCAGAGGCTCCAATGATGACGGATGGATGCCAATGGAGGAAATATGGGCAGAAGATGGCAAAAGGAAACCCATGTCCAAGAGCATACTACAGATGCACCATGGCTGCAGGTTGCCCTGTTAGAAAACAGGTACAAAGGTGTGCTGAGGACAGAACAATACTAGTAACAACATATGAAGGGAATCACAACCACCCTCTGCCACCAGCAGCAATGGCAATGGCACAAACAACATCTTCAGCAGCAAGAATGCTTCTCTCGGGATCAATGTCAAGCAGTGATGGCCTTATGAATGCTAACTTTCTAACAAGGACACTCCTTCCTTGCTCCTCAAGCATGGCCACAATCTCAGCCTCAGCACCATTCCCAACTGTCACTTTGGATCTCACTCACTCCCCTAACCCTTTGCAATTCCCAAACCACCAAAACCACTTCCAATTACCATTCCCTCACTCACCCCCTTCTTCATTGCTGCCTCACATCTTTGGCCACGCTCTTTATAACCACTCTAAGTTCTCAGGCCTTCAACTCTCTCAGGATGCTGATCCTTCTTCTCAGCCTCCCCCGCCGCCTCCGCAGCTCGCCGATTCAGTTAGTGCTGCCACTGCTGCCATTGCAGCTGATCCTAACTTCACTGCTGCTTTGGCAGCTGCTATTACTTCCATTATTGGAGGTGCACAACACCAAAACAATAATGGCAACACCAACAATAGCACTGTTGTTAATAATGGCAACAACACTAGTACTCCCAACAACAATACCAATGGAAGCAATAATAATATCAACAGTTCCAATTTCTCATCAGAGAACTAG 1524 0.4902 MDNTTLTTTTTATATNSLKPFQVNLTCSLHHHDKRPLIDEHDFFSASASASASAPPPHHHHHNTMNSDILDSKVNTGLNLLTTNTSSDQSVVDDDISPNSHQKRPVPDQTVVILAELERTKAENQRLRERLDRVTAEYKALQMQVVALMQQHKPEEEEEKKQDAAPRQFMDLGLATNGAETGEEASLSSSERSKSPERKNGSSDDHEKNSREDSPLAPRNVDQAEATMRKARVSVRARSEAPMMTDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSSDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTHSPNPLQFPNHQNHFQLPFPHSPPSSLLPHIFGHALYNHSKFSGLQLSQDADPSSQPPPPPPQLADSVSAATAAIAADPNFTAALAAAITSIIGGAQHQNNNGNTNNSTVVNNGNNTSTPNNNTNGSNNNINSSNFSSEN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02110 507 Gene3D WRKY domain 229 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst8g02110 507 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst8g02110 507 MobiDBLite consensus disorder prediction 179 238 - -
Arst8g02110 507 MobiDBLite consensus disorder prediction 413 433 - -
Arst8g02110 507 MobiDBLite consensus disorder prediction 68 106 - -
Arst8g02110 507 MobiDBLite consensus disorder prediction 467 507 - -
Arst8g02110 507 SUPERFAMILY WRKY DNA-binding domain 237 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst8g02110 507 FunFam probable WRKY transcription factor 31 229 306 - -
Arst8g02110 507 MobiDBLite consensus disorder prediction 190 215 - -
Arst8g02110 507 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst8g02110 507 MobiDBLite consensus disorder prediction 48 107 - -
Arst8g02110 507 Pfam WRKY DNA -binding domain 246 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst8g02110 507 Coils Coil 114 151 - -
Arst8g02110 507 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 80 478 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02110 Arst-Chr8 29797327 29799589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02110 35 474 WRKY Transcription Factor Family AT1G62300 51.967 4.04e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst8g02110 WRKY 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02110 - - aip:107613963 742.265