LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g02098	ATGTCGATGGACCAAGCAATTTGTGAAGAAGCATTGTACATCACTATATATGATGATAGTGATCATTATAATTCTTGCAACGTTAATGTTCCGTCGCTTAGTGAAGATGACACACAACATGTGAACAAATTTAGTTTCAATTGTTTATTAGTTGGGGAAAGATCTATAAACGTTGTTCAATTAGAGGACGATGTAATGGCAGTGAATCATGAGTTATCCGATCACACTGAAATTCCAATAGAAGAAATCCTGTACGTAGGATTGAGAGTTGTTTCCTTGCAGCGGGCACAAGAGTTTTATTCTAATTATGTAGAAAAAGTTAGCTTCGTGACTAGGATTAGAAATACTAACTTTGACAAGACCAGAAAGGAATCAAAGATACCCATTAACCAATTGTTACACTGTAGTCATGAAGGTTATCGGGAATCTCGAGTGAAGGTAGCAACTCGGATAAAGAGAATAATAACAGCCAGATGCAAAGCAAGGATGTACATGATACTTGATAGGAAGAAGGATAATTGGATGGTGTCCAAATTAAAACTGAAGAACACTTATCCGTGTTCTGCCAAGCAAGCTGTGCATTACACTGAGTACAGAAAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGGCATACGGCCCAACAAGACTTATCTCGCACTGACGAATGAGGTTGGTGGCTCGTTGAATTTGGGTTACTCAGAAAAGGACGTGAGGAACTACATTACGAGCAATCTGCGTTGTGCTGATGGAAACGCATATGTGAAGGAAATGATTAGCTATTTCATGCGAATGAAAGATATCAACCTGAATTTCTTTTATGCAGTTGATGTAGATAAAACTAACAAATTTAAAAGTGTGCTCTGGGTAGATGCAAGATGTAGGGCGTCTTATGAATATTATGGTGACGTAGAATCGTTTGATACAACGTACAGTAGAAACAAGCACGGACTTCCATTTGCATCTTTTGTTGGTGTCAACCATTACGGCAAGTGCACGCTGCTCGGATGCGCTTTGCTAGAAAATGAGAAAATTCGTAGCTTTGAGTGA	1065	0.3915	MSMDQAICEEALYITIYDDSDHYNSCNVNVPSLSEDDTQHVNKFSFNCLLVGERSINVVQLEDDVMAVNHELSDHTEIPIEEILYVGLRVVSLQRAQEFYSNYVEKVSFVTRIRNTNFDKTRKESKIPINQLLHCSHEGYRESRVKVATRIKRIITARCKARMYMILDRKKDNWMVSKLKLKNTYPCSAKQAVHYTEYRKLTMHAKCVIQNNDEAGIRPNKTYLALTNEVGGSLNLGYSEKDVRNYITSNLRCADGNAYVKEMISYFMRMKDINLNFFYAVDVDKTNKFKSVLWVDARCRASYEYYGDVESFDTTYSRNKHGLPFASFVGVNHYGKCTLLGCALLENEKIRSFE	354

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g02098	354	Pfam	MULE transposase domain	311	354	IPR018289	-
	Arst8g02098	354	Pfam	FAR1 DNA-binding domain	98	182	IPR004330	-
	Arst8g02098	354	PANTHER	OS01G0519700 PROTEIN	85	353	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g02098	Arst-Chr8	29638423	29640031	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst8g02098		FAR1	1.1e-07	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g02098	-		-	ahf:112803266	559.296