Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02093 ATGGACATGATGGGAACCGAACGTGTTTGTTATGTTTACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGTAGCAGTTTGCTGACCATAGTGACAGTTAGATGTGGGCATTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCTCTTCAAGCATTGCCTCCTCAAGACCCTCACCATCATCAGAAGCAGCACCTGAGCTTCCAAGATCCAAGCAGCAAGGAACTGGGATCATCCTCGTCAAGATGCAACAAGTTATCAGCAGCATTTGATCCTGTAGACCATGATCCCCAACCTAGGATCCCTCCCATTCGTCCTCCGGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGAATTAAGGCTAGCAACCCAGACATAAGCCACAGGGAAGCTTTCAGCACAGCAGCCAAAAATTGGGCTCATTTCCCTCACATTCACTTTGGATTAAAGCTGGATGGAAACAAACAAGCAAAGTTGGACCAAGGGGAAGGGACTCAAAAGTCTAATGGATTCTACTGA 555 0.4613 MDMMGTERVCYVYCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQALPPQDPHHHQKQHLSFQDPSSKELGSSSSRCNKLSAAFDPVDHDPQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGTQKSNGFY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02093 184 CDD HMG-box_SF 115 151 - -
Arst8g02093 184 SUPERFAMILY HMG-box 106 154 IPR036910 -
Arst8g02093 184 MobiDBLite consensus disorder prediction 72 89 - -
Arst8g02093 184 MobiDBLite consensus disorder prediction 56 116 - -
Arst8g02093 184 Pfam YABBY protein 6 161 IPR006780 GO:0007275
Arst8g02093 184 Gene3D High mobility group box domain 106 173 IPR036910 -
Arst8g02093 184 FunFam Axial regulator YABBY 106 176 - -
Arst8g02093 184 PANTHER PROTEIN YABBY 6-RELATED 6 170 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02093 Arst-Chr8 29579087 29586682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02093 4 184 C2C2-YABBY Transcription Factor Family AT1G08465 65.591 2.10e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Arst8g02093 YABBY 6.9e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02093 K25796 - gmx:100785458 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02093 8 29579087 29586682 Arst3g01438 3 12902560 12912152 PCT