Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02092 ATGGACATGATGGGAACCGAACGTGTTTGTTATGTTTACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGTAGCAGTTTGCTGACCATAGTGACAGTTAGATGTGGGCATTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCTCTTCAAGCATTGCCTCCTCAAGACCCTCACCATCATCAGTCACAGAAGCAGCACCTGAGCTTCCAAGATCCAAGCAGCAAGGAACTGGGATCATCCTCGTCAAGATGCAACAAGTTATCAGCAGCATTTGATCCTGTAGACCATGATCCCCAACCTAGGATCCCTCCCATTCGTCCTCCGGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGAATTAAGGCTAGCAACCCAGACATAAGCCACAGGGAAGCTTTCAGCACAGCAGCCAAAAATTGGGCTCATTTCCCTCACATTCACTTTGGATTAAAGCTGGATGGAAACAAACAAGCAAAGTTGGACCAAGGGGAAGGGACTCAAAAGTCTAATGGATTCTACTGA 561 0.4617 MDMMGTERVCYVYCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQALPPQDPHHHQSQKQHLSFQDPSSKELGSSSSRCNKLSAAFDPVDHDPQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGTQKSNGFY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02092 186 CDD HMG-box_SF 117 153 - -
Arst8g02092 186 Pfam YABBY protein 6 163 IPR006780 GO:0007275
Arst8g02092 186 MobiDBLite consensus disorder prediction 55 118 - -
Arst8g02092 186 SUPERFAMILY HMG-box 108 156 IPR036910 -
Arst8g02092 186 PANTHER PROTEIN YABBY 6-RELATED 6 172 IPR006780 GO:0007275
Arst8g02092 186 Gene3D High mobility group box domain 108 175 IPR036910 -
Arst8g02092 186 MobiDBLite consensus disorder prediction 70 91 - -
Arst8g02092 186 FunFam Axial regulator YABBY 108 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02092 Arst-Chr8 29579087 29586695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02092 4 186 C2C2-YABBY Transcription Factor Family AT1G08465 64.894 5.15e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Arst8g02092 YABBY 2e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02092 K25796 - gmx:100785458 303.138