Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02060 ATGGTTCTTATTGCTCGAATTCGGCACCCGTACATTGTGGAATTCAAAGAGGCTTGGGTTGAGAAGGGTTGCTTTGTCTGCATTGTTACTGGATACTGTGAAGGTGGAGACATGGCTGCATTGATGAAAAAATCAAACGGGGTATACTTTCCGGAGGAGAAACTCTGCAAGTGGTTTGCACAATTACTCTTAGCGGTGGAATATCTGCATTCCAATTATGTATTACATCGTGACTTAAAGTGTTCAAACATTTTTCTTACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGGCTTGCCAAGACACTAAAAGCAGATGATTTGGCATCTTCGGTGGTAGGAACTCCCAACTACATGTGTCCTGAACTGCTTGCAGATATTCCTTACGGATTCAAATCTGATATTTGGTCATTAGGGTGTTGTATATATGAAATGGCTGCTCATCGCCCTGCATTTAAAGCTTTTGATATGGCAGGATTGATAAGTAAGGTGAACCGTACCGCAATCGGCCCATTGCCTTCCTGTTATTCCCCATCTTTGAAAATGCTAATAAAGTGCATGCTGCGAAAAAATCCCGAGCATCGTTTATCAGCATCTGAGATCTTAAAACACCCCTATCTGCAACCTTATGTTGATCAATATCGTCCGTCTTTTTGTCCGCCTACAACCTGTTCTCCTCAAAAGTCTATTGGAGTTTTCCATGATCCTCGAAGAAATAGGCCTGAAAGCCAAAACAATAATAGCTCAAGCAGTGACAAAGATTGTTTGATATCAAATGAGAGAAACATGGAAATGGCAGAGCCAAATTTTGGTAGAGAAACCACAATTCAGGCATTAGTTGTTGATGATGGCTCTGAGTATCCCCTGCCCAGTGAAGAAGGAAATGGTTCCAGCAATGCTAAAACAGTAAAGGTGGTGAAGCCATCTCATAATGAAAACCATCCAAATATTGCATCTAAGGAACAAAACCTTTTCAAGAATACAATGATTGCTTTAAAAGACAGAAGAGTTAGAGAATCAAGTTCTCCAATGAGAGGCAATCACATAAAGGCTGGCAATGTATCCATCCAAAAAATAAATACAGAGATACCTTCCAAATTGCCGAAACCTAGTTTTGGTTTGAGGCCTAATTTAGAGGCACCAACTATTGCACCTGCAAAAGCAACCTTTGATTCTGCAAAGGGATCACATAGTTTAAAGTATCAGTTACCGATGACAGAATCATTGCCGAAAACCAGACCTCGAGATATTGTGACTCTGCCATCCGGCCGAACCAAACAAACAGTTGGAAATGGAGTTCCTGCCAAGCCAAGGCAAATGACTCCTACAAGATCACTCAGACCACCTTCATCTCCAGTTCGTATGAGGCAGGCCAGGCTTGATTTTCCAAACATAGTGAATGATATAAGAAACTCGAATCCAGTGGTTCATGAGCCTAAGATAAGCCATCATAGGTTGACTAACAGTCATATACCACGTGTTTCGAGAGATATTAGGAAAGAGCCTCGGAAGTATTCTGAACATTGCTCAAAAGGAATGCAAACAGACAGCAGCAATTCAGTCTCATCTTCGGTGTCTATTCAAGGATTTGAACTTTGTGATGATGCAACTACTTTTATGGACTTGAGTGAACTCACACTTGCTGATCATGAGAGTATAAACCACATTGAGAATGTGGAATCACATCTAAATAGCAACTTGCCTCTTACGCATTCCGAGACATCTGAAGATGTGTCTTGGGAATCTGCAAGGCTTCCACGGAGCTTCCATAATAGCAATACAAGCAATGAGAATCTAAGTTCCACTTTATCTCAGGATCACTCAGTTCAAGATCATAAGGGAATTTTCGCTTCTGATGATGGTTGTCCCATAAATCGGACAACCATATCTGCTGCCTCAGGTTGTGGTAGAAAATCTCTACAGCCCTCTGCTTCAGCTGCAAAAGAATCAAAAGAGCTTCAAGACATTTCTGTGGAAACTACTTCAGCTAAGTCTCTGAAGCATCCAATTCCCATTTCTGAAGAGAAGTCTTCTTGTGAAGAAAGCACACCGGATAATAGGCCTGATAAAGATAGCCAACCAAAACTTATGATCACCCCAAGTGGTGATGAAGAATCCAAGGTAACCAAAAGATTGTCATCAGTGGCTGAAACAGATCCTCTGATAGTCTCCACTAAAATTCCAAGCCAGGACATTTTGCAAGAAGAGAAAGGAGCAGTTTTACAGAACACATCAGCTGAAATTTCATCTGCTGATCAACTTCCTCCAGCTTATGGTGATGTCATCCATGTTATACGGCATAGTAGTTATCGTGTCGGGAGTGAGCAGCCGGTGAAGGAATCTGTAGAAGTGGGAGTTCAAAATGTTGATGTTGGCAAGTTCATCAGCATTGTAAAGGATGATGCAGAGATGAGAAATGTAAGCACTCCTTTGGCCCTTAATTCTTCAGATTCTTCTGATCATTTAGAATCTCCAAGTTGCCCTGGCACGTTGAGTTTGGAATCAAGTACTCTTGACCAACCTACCATTAAGGATCAAGATTTGAAAAGCCCTGATTCTACAGTATCAAAATCTGATTCCACTAAATATGAGACTATTACAGTCAAAGATGAAACACAGGCAAAGGAAATTTTGGATGTGAAATCTTCAAGACAGAGAGCTGAGGCACTTGAAGGGCTCTTAGAACTTTCTGCAGACTTGCTGGAGCAGAACAAATTGGAGGAACTTTCAGTTGTTTTGAAGCCATTTGGAAAAGATAAGGTATCCCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTAAAAGGATTAATGATTGAGGATAGTGTGGGAAGAGCTTCATGA 2844 0.4135 MVLIARIRHPYIVEFKEAWVEKGCFVCIVTGYCEGGDMAALMKKSNGVYFPEEKLCKWFAQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKVNRTAIGPLPSCYSPSLKMLIKCMLRKNPEHRLSASEILKHPYLQPYVDQYRPSFCPPTTCSPQKSIGVFHDPRRNRPESQNNNSSSSDKDCLISNERNMEMAEPNFGRETTIQALVVDDGSEYPLPSEEGNGSSNAKTVKVVKPSHNENHPNIASKEQNLFKNTMIALKDRRVRESSSPMRGNHIKAGNVSIQKINTEIPSKLPKPSFGLRPNLEAPTIAPAKATFDSAKGSHSLKYQLPMTESLPKTRPRDIVTLPSGRTKQTVGNGVPAKPRQMTPTRSLRPPSSPVRMRQARLDFPNIVNDIRNSNPVVHEPKISHHRLTNSHIPRVSRDIRKEPRKYSEHCSKGMQTDSSNSVSSSVSIQGFELCDDATTFMDLSELTLADHESINHIENVESHLNSNLPLTHSETSEDVSWESARLPRSFHNSNTSNENLSSTLSQDHSVQDHKGIFASDDGCPINRTTISAASGCGRKSLQPSASAAKESKELQDISVETTSAKSLKHPIPISEEKSSCEESTPDNRPDKDSQPKLMITPSGDEESKVTKRLSSVAETDPLIVSTKIPSQDILQEEKGAVLQNTSAEISSADQLPPAYGDVIHVIRHSSYRVGSEQPVKESVEVGVQNVDVGKFISIVKDDAEMRNVSTPLALNSSDSSDHLESPSCPGTLSLESSTLDQPTIKDQDLKSPDSTVSKSDSTKYETITVKDETQAKEILDVKSSRQRAEALEGLLELSADLLEQNKLEELSVVLKPFGKDKVSPRETAIWLAKSLKGLMIEDSVGRAS 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02060 947 MobiDBLite consensus disorder prediction 229 255 - -
Arst8g02060 947 MobiDBLite consensus disorder prediction 669 692 - -
Arst8g02060 947 MobiDBLite consensus disorder prediction 634 714 - -
Arst8g02060 947 FunFam Serine/threonine-protein kinase Nek5 35 279 - -
Arst8g02060 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Arst8g02060 947 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02060 947 Pfam Protein kinase domain 3 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02060 947 MobiDBLite consensus disorder prediction 634 667 - -
Arst8g02060 947 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 3 895 - -
Arst8g02060 947 MobiDBLite consensus disorder prediction 811 862 - -
Arst8g02060 947 MobiDBLite consensus disorder prediction 413 454 - -
Arst8g02060 947 MobiDBLite consensus disorder prediction 587 607 - -
Arst8g02060 947 SUPERFAMILY Protein kinase-like (PK-like) 3 252 IPR011009 -
Arst8g02060 947 Gene3D Transferase(Phosphotransferase) domain 1 1 269 - -
Arst8g02060 947 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02060 Arst-Chr8 29249883 29255461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02060 3 218 MAP Kinase Kinase Kinase AT3G06030 35.135 3.11e-33 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Arst8g02060 Pkinase 2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02060 K08857 - gmx:100780141 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02060 8 29249883 29255461 Arst8g02060 8 29249883 29255461 ECH
Arst8g02060 8 29249883 29255461 Arst3g01394 3 12097657 12103980 PCT