Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02059 ATGTTTCTCAGCAATAATTTTTGTAGCTGGAGAGAGGTACCAATGGGGTCTCGCATGGATCAGTACGAGATCATGGAGCAGATCGGCAGAGGAGCATTTGGAGCTGCAATTCTCGTTCATCACAAGACAGAGAAGAAAAAATATGTGTTGAAGAAAATAAGGCTTGCTAGGCAGACTGAAAGGTGCAGAAGAGCTGCACATCAAGAGATGGTTCTTATTGCTCGAATTCGGCACCCGTACATTGTGGAATTCAAAGAGGCTTGGGTTGAGAAGGGTTGCTTTGTCTGCATTGTTACTGGATACTGTGAAGGTGGAGACATGGCTGCATTGATGAAAAAATCAAACGGGGTATACTTTCCGGAGGAGAAACTCTGCAAGTGGTTTGCACAATTACTCTTAGCGGTGGAATATCTGCATTCCAATTATGTATTACATCGTGACTTAAAGTGTTCAAACATTTTTCTTACCAAGGATCAGGATGTTCGCCTAGGGGATTTTGGGCTTGCCAAGACACTAAAAGCAGATGATTTGGCATCTTCGGTGGTAGGAACTCCCAACTACATGTGTCCTGAACTGCTTGCAGATATTCCTTACGGATTCAAATCTGATATTTGGTCATTAGGGTGTTGTATATATGAAATGGCTGCTCATCGCCCTGCATTTAAAGCTTTTGATATGGCAGGATTGATAAGTAAGGTGAACCGTACCGCAATCGGCCCATTGCCTTCCTGTTATTCCCCATCTTTGAAAATGCTAATAAAGTGCATGCTGCGAAAAAATCCCGAGCATCGTTTATCAGCATCTGAGATCTTAAAACACCCCTATCTGCAACCTTATGTTGATCAATATCGTCCGTCTTTTTGTCCGCCTACAACCTGTTCTCCTCAAAAGTCTATTGGAGTTTTCCATGATCCTCGAAGAAATAGGCCTGAAAGCCAAAACAATAATAGCTCAAGCAGTGACAAAGATTGTTTGATATCAAATGAGAGAAACATGGAAATGGCAGAGCCAAATTTTGGTAGAGAAACCACAATTCAGGCATTAGTTGTTGATGATGGCTCTGAGTATCCCCTGCCCAGTGAAGAAGGAAATGGTTCCAGCAATGCTAAAACAGTAAAGGTGGTGAAGCCATCTCATAATGAAAACCATCCAAATATTGCATCTAAGGAACAAAACCTTTTCAAGAATACAATGATTGCTTTAAAAGACAGAAGAGTTAGAGAATCAAGTTCTCCAATGAGAGGCAATCACATAAAGGCTGGCAATGTATCCATCCAAAAAATAAATACAGAGATACCTTCCAAATTGCCGAAACCTAGTTTTGGTTTGAGGCCTAATTTAGAGGCACCAACTATTGCACCTGCAAAAGCAACCTTTGATTCTGCAAAGGGATCACATAGTTTAAAGTATCAGTTACCGATGACAGAATCATTGCCGAAAACCAGACCTCGAGATATTGTGACTCTGCCATCCGGCCGAACCAAACAAACAGTTGGAAATGGAGTTCCTGCCAAGCCAAGGCAAATGACTCCTACAAGATCACTCAGACCACCTTCATCTCCAGTTCGTATGAGGCAGGCCAGGCTTGATTTTCCAAACATAGTGAATGATATAAGAAACTCGAATCCAGTGGTTCATGAGCCTAAGATAAGCCATCATAGGTTGACTAACAGTCATATACCACGTGTTTCGAGAGATATTAGGAAAGAGCCTCGGAAGTATTCTGAACATTGCTCAAAAGGAATGCAAACAGACAGCAGCAATTCAGTCTCATCTTCGGTGTCTATTCAAGGATTTGAACTTTGTGATGATGCAACTACTTTTATGGACTTGAGTGAACTCACACTTGCTGATCATGAGAGTATAAACCACATTGAGAATGTGGAATCACATCTAAATAGCAACTTGCCTCTTACGCATTCCGAGACATCTGAAGATGTGTCTTGGGAATCTGCAAGGCTTCCACGGAGCTTCCATAATAGCAATACAAGCAATGAGAATCTAAGTTCCACTTTATCTCAGGATCACTCAGTTCAAGATCATAAGGGAATTTTCGCTTCTGATGATGGTTGTCCCATAAATCGGACAACCATATCTGCTGCCTCAGGTTGTGGTAGAAAATCTCTACAGCCCTCTGCTTCAGCTGCAAAAGAATCAAAAGAGCTTCAAGACATTTCTGTGGAAACTACTTCAGCTAAGTCTCTGAAGCATCCAATTCCCATTTCTGAAGAGAAGTCTTCTTGTGAAGAAAGCACACCGGATAATAGGCCTGATAAAGATAGCCAACCAAAACTTATGATCACCCCAAGTGGTGATGAAGAATCCAAGGTAACCAAAAGATTGTCATCAGTGGCTGAAACAGATCCTCTGATAGTCTCCACTAAAATTCCAAGCCAGGACATTTTGCAAGAAGAGAAAGGAGCAGTTTTACAGAACACATCAGCTGAAATTTCATCTGCTGATCAACTTCCTCCAGCTTATGGTGATGTCATCCATGTTATACGGCATAGTAGTTATCGTGTCGGGAGTGAGCAGCCGGTGAAGGAATCTGTAGAAGTGGGAGTTCAAAATGTTGATGTTGGCAAGTTCATCAGCATTGTAAAGGATGATGCAGAGATGAGAAATGTAAGCACTCCTTTGGCCCTTAATTCTTCAGATTCTTCTGATCATTTAGAATCTCCAAGTTGCCCTGGCACGTTGAGTTTGGAATCAAGTACTCTTGACCAACCTACCATTAAGGATCAAGATTTGAAAAGCCCTGATTCTACAGTATCAAAATCTGATTCCACTAAATATGAGACTATTACAGTCAAAGATGAAACACAGGCAAAGGAAATTTTGGATGTGAAATCTTCAAGACAGAGAGCTGAGGCACTTGAAGGGCTCTTAGAACTTTCTGCAGACTTGCTGGAGCAGAACAAATTGGAGGAACTTTCAGTTGTTTTGAAGCCATTTGGAAAAGATAAGGTATCCCCAAGGGAGACAGCCATTTGGTTAGCCAAGAGTCTAAAAGGATTAATGATTGAGGATAGTGTGGGAAGAGCTTCATGA 3051 0.4156 MFLSNNFCSWREVPMGSRMDQYEIMEQIGRGAFGAAILVHHKTEKKKYVLKKIRLARQTERCRRAAHQEMVLIARIRHPYIVEFKEAWVEKGCFVCIVTGYCEGGDMAALMKKSNGVYFPEEKLCKWFAQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKVNRTAIGPLPSCYSPSLKMLIKCMLRKNPEHRLSASEILKHPYLQPYVDQYRPSFCPPTTCSPQKSIGVFHDPRRNRPESQNNNSSSSDKDCLISNERNMEMAEPNFGRETTIQALVVDDGSEYPLPSEEGNGSSNAKTVKVVKPSHNENHPNIASKEQNLFKNTMIALKDRRVRESSSPMRGNHIKAGNVSIQKINTEIPSKLPKPSFGLRPNLEAPTIAPAKATFDSAKGSHSLKYQLPMTESLPKTRPRDIVTLPSGRTKQTVGNGVPAKPRQMTPTRSLRPPSSPVRMRQARLDFPNIVNDIRNSNPVVHEPKISHHRLTNSHIPRVSRDIRKEPRKYSEHCSKGMQTDSSNSVSSSVSIQGFELCDDATTFMDLSELTLADHESINHIENVESHLNSNLPLTHSETSEDVSWESARLPRSFHNSNTSNENLSSTLSQDHSVQDHKGIFASDDGCPINRTTISAASGCGRKSLQPSASAAKESKELQDISVETTSAKSLKHPIPISEEKSSCEESTPDNRPDKDSQPKLMITPSGDEESKVTKRLSSVAETDPLIVSTKIPSQDILQEEKGAVLQNTSAEISSADQLPPAYGDVIHVIRHSSYRVGSEQPVKESVEVGVQNVDVGKFISIVKDDAEMRNVSTPLALNSSDSSDHLESPSCPGTLSLESSTLDQPTIKDQDLKSPDSTVSKSDSTKYETITVKDETQAKEILDVKSSRQRAEALEGLLELSADLLEQNKLEELSVVLKPFGKDKVSPRETAIWLAKSLKGLMIEDSVGRAS 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02059 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Arst8g02059 1016 MobiDBLite consensus disorder prediction 880 931 - -
Arst8g02059 1016 MobiDBLite consensus disorder prediction 482 523 - -
Arst8g02059 1016 MobiDBLite consensus disorder prediction 656 676 - -
Arst8g02059 1016 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 19 964 - -
Arst8g02059 1016 SUPERFAMILY Protein kinase-like (PK-like) 18 321 IPR011009 -
Arst8g02059 1016 Gene3D Transferase(Phosphotransferase) domain 1 104 348 - -
Arst8g02059 1016 CDD STKc_Nek 21 276 - -
Arst8g02059 1016 Gene3D Phosphorylase Kinase; domain 1 8 101 - -
Arst8g02059 1016 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02059 1016 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02059 1016 FunFam Serine/threonine-protein kinase Nek5 104 348 - -
Arst8g02059 1016 MobiDBLite consensus disorder prediction 738 761 - -
Arst8g02059 1016 MobiDBLite consensus disorder prediction 703 736 - -
Arst8g02059 1016 MobiDBLite consensus disorder prediction 298 324 - -
Arst8g02059 1016 FunFam Serine/threonine-protein kinase Nek2 19 101 - -
Arst8g02059 1016 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g02059 1016 MobiDBLite consensus disorder prediction 703 783 - -
Arst8g02059 1016 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02059 Arst-Chr8 29249883 29256082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02059 26 287 MAP Kinase Kinase Kinase AT3G06030 33.692 6.04e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Arst8g02059 Pkinase 7.5e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02059 K08857 - gmx:100780141 1211.44