Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02018 ATGTATCATCATCAAGGGAAGAACATGCACTCTTCTTCAAGAATGCCAATCCCCTCTGAGAGGCACATGTTCCTTCAAACAGGAAACGGGTCTGGTGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCACGATTGAAATGGACGCCGGATCTTCATGCCAGGTTCATAGAAGCAGTGAACCAGTTAGGTGGAGCTGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGTCTTACTTTATATCATCTGAAGAGCCATCTGCAGAAGTACAGATTGAGCAAGAATTTGCATGGACCAAATAACACTGTAACACACAAAATCACAACAAATGTGGGGGCAACAACAAGTGAAAGATCACTTTCAGAACCCAGTGGAACTCATATGAACAAGTTAAGCCTTGTCCCACAGACTAACAAAGATTTACATATAAGTGAGGCACTGCAGATGCAAATTGAAGTGCAGCGAAGGCTAAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTCGGATAGAGGCACAAGGAAAATACCTGCAGTCTGTGCTAGAGAAAGCTCAAGAGACACTTGGTAGACAAAATTTGGGAATGGTAGGACTTGAAGCTGCTAAAGTTCAACTATCAGAGCTGGTGTCCAAGGTCTCCTCCCAGTGCTTGAACTCGGCATTTTCAGAGCTGAAGGAACTACAAGGATTTTGCCCCAAGCAACCACAAACCAACCAGCCAAATGATTGCTCAATAGATAGTTGCCTCACATCTTGTGAAGGGTCACAGAAGGAGCAAGAGATACAGAATGGTGGGATAGGTTTAAGGCACTTAAATGGCCATGGCCATGCATTCATGGAAAGAAAGGGAGGCACAGAAGCTCCTAAATGGAGTAATGAAGTGAAAAACAACACCTTTCTAGCTCCATTAGGCAAGAATTCAGAAAGAAGTAGCTATGGTGCAGAGAGAAGCAGTGGAAACTTGTCTATGAGCATTGGACTTGAAAGGGAAACTGAGAATGGAAGCAGCATGTACACTGAGAGTCACACTCACACAGATGGTGAGTTCTGGCACAGAAACAGCAATAGGACAGAACCAAAGAATGAAGCAATGGATGGAGGAAGAGGTTCCCATGATTATAGGTTGCCTCCTCCATACTTTTCAGCAGCAAGATTGGACTTAAACTCACATGGGGATAACAATGAAGCTGCAACAACAACAACAAGCTGTAAACAACTGGACTTGAACAGATTCAGTTGGAGCTGA 1263 0.4371 MYHHQGKNMHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGPNNTVTHKITTNVGATTSERSLSEPSGTHMNKLSLVPQTNKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGMVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPKQPQTNQPNDCSIDSCLTSCEGSQKEQEIQNGGIGLRHLNGHGHAFMERKGGTEAPKWSNEVKNNTFLAPLGKNSERSSYGAERSSGNLSMSIGLERETENGSSMYTESHTHTDGEFWHRNSNRTEPKNEAMDGGRGSHDYRLPPPYFSAARLDLNSHGDNNEAATTTTSCKQLDLNRFSWS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02018 420 MobiDBLite consensus disorder prediction 343 378 - -
Arst8g02018 420 Coils Coil 149 169 - -
Arst8g02018 420 NCBIfam myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Arst8g02018 420 Pfam MYB-CC type transfactor, LHEQLE motif 147 193 IPR025756 -
Arst8g02018 420 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 325 IPR044848 GO:0003700
Arst8g02018 420 FunFam Myb family transcription factor 42 100 - -
Arst8g02018 420 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Arst8g02018 420 MobiDBLite consensus disorder prediction 350 375 - -
Arst8g02018 420 Gene3D - 42 100 - -
Arst8g02018 420 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Arst8g02018 420 Pfam Myb-like DNA-binding domain 45 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02018 Arst-Chr8 28864566 28866857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02018 75 420 G2-like Transcription Factor Family AT3G04030 50.000 5.76e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst8g02018 Myb_DNA-binding 3.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02018 - - gmx:100810396 620.542