Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g02004 ATGGCGGAAGAACACAGATGCCAAGCACCGCGCCTCTGCGCCAACAACTGCGGATTCTTCGGCAGCGCCGCCACGCAGAACCTCTGCTCCAAGTGTTACCGCGATCTCCAGCTCAAGGAGCAACAATCCTCCTCCGCCAAGCTCGTTCTCAACCAATCCTTGGTTCCGCCATCTCCGTCACCCGCCGCCGTTGCTCAGCCGTCTTCCTCTTCGTTTCCGCCAGCTGCAGCGATCGATTCGTCATCTTCGGCGGTAGATGCTGTGGATCAGCCACGCGCGGAGGCGGCGAAACCAGTTCTGCAGAACCGGTGCATGACGTGCAAGAGGCGCGTGGGGCTCACGGGGTTCAAGTGCCGGTGCGGGTTGACGCTGTGCGGGGTCCACCGGTATCCTGAGCAGCATGGTTGTGAGTTCGATTTCAAGGGATTAGGGAGGGATCAGATCGCGAAGGCGAATCCCGTCATCAAGGCTGAGAAGCTTGACAAGATCTGA 492 0.5976 MAEEHRCQAPRLCANNCGFFGSAATQNLCSKCYRDLQLKEQQSSSAKLVLNQSLVPPSPSPAAVAQPSSSSFPPAAAIDSSSSAVDAVDQPRAEAAKPVLQNRCMTCKRRVGLTGFKCRCGLTLCGVHRYPEQHGCEFDFKGLGRDQIAKANPVIKAEKLDKI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g02004 163 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Arst8g02004 163 ProSiteProfiles Zinc finger AN1-type profile. 98 144 IPR000058 GO:0008270
Arst8g02004 163 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Arst8g02004 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Arst8g02004 163 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 163 - -
Arst8g02004 163 Gene3D - 76 159 IPR035896 -
Arst8g02004 163 SMART AN1_Zf_4 104 141 IPR000058 GO:0008270
Arst8g02004 163 SUPERFAMILY AN1-like Zinc finger 90 158 IPR035896 -
Arst8g02004 163 Pfam AN1-like Zinc finger 104 140 IPR000058 GO:0008270
Arst8g02004 163 MobiDBLite consensus disorder prediction 56 77 - -
Arst8g02004 163 FunFam Zinc finger AN1-type containing 6 78 159 - -
Arst8g02004 163 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Arst8g02004 163 Gene3D - 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g02004 Arst-Chr8 28733991 28734482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g02004 1 163 C2H2 Transcription Factor Family AT3G52800 52.047 9.67e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g02004 - - gmx:100807363 225.713