Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01983 ATGGAGTTTGAGAATAACGAAGAATCACTTTATTACTATTCTTCTTCTTCATCACTATCTTCTTCCACTTCATCTCAAACCCAACTCTCGGCCATCAGCCCACCGCCATCGTCGTCGCCATCACGCAGTCAGAAGAAGAGATCAGGGAGGAAGAAGTTCCGAGAGATGCGACACCCGGTGTACAGGGGTGTCCGGCGGAGGAACGGCAACAAGTGGGTGTGCGAAGTGAGAGAACCAATCAAGAAATCAAGAATATGGCTCGGAACTTACCCTACCCCTGAAATGGCCGCTAGGGCACACGACGCCGCAGTTCTGGCACTTAGAGGCACCTCAGCCACCTTCAATTTCCCTCTCTCCGTCCCCCTTCTTCCCCTTGCTGAGTCATCTTCACCTCAACATATTCGAGAAGCTGCTTCCAAAGCCGCACAACAAACTAGCAGTAATAATGATATTACTAACCCTCCTGTTTCTTCTTCGAATATGAATCTTTCTGTTGGTGTTGATGGTGGTGGTGGAGTAGTGGGGTCGACGTTCTTTGATGAGGAGGCAATGTTTAACATGCCTGCATTGCTTGATAGCATGGCGGAGGGTTTGCTTATAACACCACCGTCCATGAAGCGAGGAGCTTTTCATGATGATGATGAATTTCAAACTGACCTCACTCTCTGGAATTTCGACTAA 681 0.4831 MEFENNEESLYYYSSSSSLSSSTSSQTQLSAISPPPSSSPSRSQKKRSGRKKFREMRHPVYRGVRRRNGNKWVCEVREPIKKSRIWLGTYPTPEMAARAHDAAVLALRGTSATFNFPLSVPLLPLAESSSPQHIREAASKAAQQTSSNNDITNPPVSSSNMNLSVGVDGGGGVVGSTFFDEEAMFNMPALLDSMAEGLLITPPSMKRGAFHDDDEFQTDLTLWNFD 226
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01983 226 Gene3D AP2/ERF domain 60 119 IPR036955 GO:0003700|GO:0006355
Arst8g01983 226 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 14 224 IPR045277 GO:0003700
Arst8g01983 226 MobiDBLite consensus disorder prediction 16 43 - -
Arst8g01983 226 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Arst8g01983 226 CDD AP2 61 119 IPR001471 GO:0003700|GO:0006355
Arst8g01983 226 FunFam Ethylene-responsive transcription factor 2 59 118 - -
Arst8g01983 226 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Arst8g01983 226 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Arst8g01983 226 MobiDBLite consensus disorder prediction 44 58 - -
Arst8g01983 226 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Arst8g01983 226 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Arst8g01983 226 MobiDBLite consensus disorder prediction 16 58 - -
Arst8g01983 226 SUPERFAMILY DNA-binding domain 60 119 IPR016177 GO:0003677
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst8g01983 Arst-Chr8 28376712 28377392 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01983 18 226 AP2-EREBP Transcription Factor Family AT5G51990 46.512 1.76e-56 177
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst8g01983 AP2 1.1e-13 CL0081
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01983 - - aip:107610400 355.525
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01983 8 28376712 28377392 Arst8g01983 8 28376712 28377392 ECH