Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01979 ATGAGATTGGAGAAGTGTTGGTTTTGTTCCTCAACGGTATATCCTGGTCATGGAATCCAGTTCGTTCGTAATGATGCCAAGATTTTTCGATTTTGCGGGTCTAAATGCCATAAGAACTTTAAAATGAAGAGGAACCCTCGTAAGGTCAAATGGACCAAGGCATATCGAAGAGTGCATGGAAAGGATATGACACAGGATTCAACGTTTGAATTCGAGAGGAAGCGGAACAAACCTGAGAGATATGACAGGAACCTTGCTGAGAATGTGCTTAAGGCCATTCCTAAGATTGATAAGATCAGAGTCACCAGAGAGGAGAGACACCATAAGAATAGGATGAAGGGAAACAAGGTGAAGGTGCAGAGGGAGGCGACGAAGGAGTTGGAGCAGGGACCAAAGATCAAAGTCATGGTTTCCCAACAGCAATCACAGCAGAATCAACCTATGGAAGAGTGA 453 0.4415 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCGSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNKPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGNKVKVQREATKELEQGXPKIKVMVSQQQSQQNQPMEE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01979 151 PANTHER 60S RIBOSOMAL PROTEIN L24 1 134 IPR000988 -
Arst8g01979 151 MobiDBLite consensus disorder prediction 103 151 - -
Arst8g01979 151 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Arst8g01979 151 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Arst8g01979 151 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Arst8g01979 151 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Arst8g01979 151 SMART 4TRASH 6 44 IPR011017 -
Arst8g01979 151 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Arst8g01979 151 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Arst8g01979 151 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01979 Arst-Chr8 28294549 28297913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01979 1 151 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.811 6.59e-78 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01979 K02896 - gmx:100778077 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01979 8 28294549 28297913 Arst8g01979 8 28294549 28297913 ECH