Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01967 ATGGAGTTTTGGGGTGCTGAGGTTAAGGTTGGTGAGATTGTTAAAGTAGACAACAAGGAATCTGATGTCTGCATACACCTTTCTCAGGTTGCTCTTGGTGAGTCCAAGAAGGACAAATCCAGTGAGCCTGTGGTTGTTTATTTGAAAGTTGGAGAACAGAAATTTGTTGTGGGAACCCTTAACAAGGAGAAGTTTCCTCAAATTGCTCTTGATTTGGTTGTTGAGAAGGAGTTTGAGCTTTCCCACACTTCCAAGAACGCCAGTGTCCACTTTTGTGGATACAAGACACCTGTCGCTGATGATGAGGAGGATGATTTTTCAGACGATAGTAGTGATGAGGATCATCCATTGCCAGTTGCACAAAATGGAAAAACTGAAGTAAAAGTTGAGGAAGTAAAGGTTTCTCAATCTAAAAAACCTGATGCTCAGGCTGGTGCATCAAAACAAGTAAAGGTAGTTGAACCAAAGAAAACAGAGGATTCAGACGATGAATCTGATGAGGATGATGAAATTGACAGTTCAGATGAAGAGATGGAGGATGGCGAGAGTGATGAGGAGGGTGAAAGTGATGAAGATGATGATGAGGAAGATACCCCACCCAAGAAGGTGGACCAAGGAAAGAAGAGGCAAAATGAATCCGCGACAAAAACTCCTATTTCTAACAAGAAAGCAAAAAATGCTACCCCTGAAAAGACCGATGCTAAGAAAGGTGGCCATACAGCAACTCCTCACCCAGCAAAGAAGGGTGGAAAGACTCCAAACAGTGATGGCAAGGACACTCCCAAGTCTGGTGGACAATTCCTCTGCAAAAGTTGCAACAAGAATTTCAATTCTGAAACTGGTCTCCAACAACATAGCAAGGCTAAGCATGGTCAGTGA 879 0.43 MEFWGAEVKVGEIVKVDNKESDVCIHLSQVALGESKKDKSSEPVVVYLKVGEQKFVVGTLNKEKFPQIALDLVVEKEFELSHTSKNASVHFCGYKTPVADDEEDDFSDDSSDEDHPLPVAQNGKTEVKVEEVKVSQSKKPDAQAGASKQVKVVEPKKTEDSDDESDEDDEIDSSDEEMEDGESDEEGESDEDDDEEDTPPKKVDQGKKRQNESATKTPISNKKAKNATPEKTDAKKGGHTATPHPAKKGGKTPNSDGKDTPKSGGQFLCKSCNKNFNSETGLQQHSKAKHGQ 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01967 292 SUPERFAMILY beta-beta-alpha zinc fingers 261 289 IPR036236 -
Arst8g01967 292 Gene3D Classic Zinc Finger 254 292 - -
Arst8g01967 292 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Arst8g01967 292 MobiDBLite consensus disorder prediction 226 240 - -
Arst8g01967 292 MobiDBLite consensus disorder prediction 256 292 - -
Arst8g01967 292 MobiDBLite consensus disorder prediction 160 198 - -
Arst8g01967 292 MobiDBLite consensus disorder prediction 99 292 - -
Arst8g01967 292 ProSitePatterns Zinc finger C2H2 type domain signature. 269 290 IPR013087 -
Arst8g01967 292 FunFam Histone deacetylase HDT1 1 100 - -
Arst8g01967 292 Gene3D Nucleoplasmin core domain 1 101 - -
Arst8g01967 292 ProSiteProfiles Zinc finger C2H2 type domain profile. 267 292 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01967 Arst-Chr8 28141696 28144259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01967 1 109 C2H2 Transcription Factor Family AT5G03740 50.459 6.70e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst8g01967 NPL 3.9e-14 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01967 - - lang:109358867 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01967 8 28141696 28144259 Arst8g01967 8 28141696 28144259 ECH
Arst8g01967 8 28141696 28144259 Arst3g00071 3 498791 500932 PCT