Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01947 ATGGCGGAGGACCGGAAGAATGAGGGAAGTGACTACAGTTCGGAGGAGGAAGGAACTGAGGATTACAGGCGCGGAGGGTACCATGCGGTTCGGATTGGGGATACATTCAAGAATGGATGTTATGTGGTTCAGAGCAAGCTTGGTTGGGGCCATTTTTCCACCGTGTGGCTCGCTTGGGACACTCAGAAATCGGNTCAGAGATATGTCGCCCTAAAAATTCAGAAGAGTGCTCAGCACTACACTGAAGCAGCAATGGATGAAATAAAGATTCTCAAACAAATTGCAGATGGAGATCCACATGACAATAAATGTGTTGTGAAGCTTTTGGATCACTTCAAGCATTCAGGACCCAATGGCCAGCATGTCTGTATGGTTTTTGAATTCCTTGGGGACAATCTTCTCACTCTTATCAAGTATAGTGATTATCGAGGAGTTCCTCTTCCCATAGTTAAGGAAATCTGCTTCCATATTTTGGTGGGTTTGGATTACTTGCATCGTGAGCTTTCTATAATACACACTGATTTGAAGCCGGAGAATGTCTTGCTTCTGTCACCACTGGATCCATCTAAGGATCCTAGGAAATCAGGCATTCCACTTATTGCTCCAAATACGAAGGAGAAGATCAGCAATGGGACCATAAAAGACGAAAGAAGTTTGCATGCAGACTTGACCAAGAACCAGAAAAAGAAAATGCGGAAAAAGGCTAAAAAGGCAGCTCAAGCTTGTGTTGGGATGGAAAGTCCCGAGGAAGCCGAGGAGGATGGTAAAACACCTGAGCAAGATGAATGTAGTAAAGATGTGGAACTAAGTTTAGAATCCAGTGAAGTTAATGGTTCTGTGGGCAAAGATGAATCGACAAAGGCTTCTGAAACCAAGGATGATCCCCAAGGAAGCCGTGGTCAAAGGAAATCTGAAAGAAAGAAGTTACTTGCCTCTGCTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCGTGTTGGACTTATAAACAATTCACAAACGATATTCAGACGAGGCAGTATAGATGTCCTGAAGTTATTCTCGGATCAAAATACTCAACTCCAGCAGATCTATGGTCTTTTGCGTGCATTTGCTTTGAGCTTGCGACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGACAGGGATGAGGATCATCTGGCCTTGATGATGGAGCTTCTCGGAATGATGCCTCGCAAGATTGCATTAGGTGGTCGTTATTCGCGCGAGTTTTTCAATAGATATGGTGATTTGAGGCACATCCGTCAGTTGCGGTTCTGGCCTCTTAACAAAGTACTGATGGAGAAATATGATTTCAGCGAGCAAGATGCAAATGACATGGCTGGCTTCATTATTCCATTACTGGATTTTGTCCCTGACAAGAGGCCAACAGCAGCTCAGTGCCTTACTCATCCATGGTTGAGTACAAGACCTCAGACTCTCAAACCTTCGTCCACACCTGTGCAACCGGGGGAGAAAGATGGAGAGACATTGGAAAAGACAAAGGAAAAGGCTGAGCTGGAAGCTGTGGAAGTTGGCATTGGGAATATAGCTATTGATGGAGCTCCAAAGCCAGTTGAAATGTCCCAAACTATACAACAGTTGTCAAAATAA 1623 0.4424 MAEDRKNEGSDYSSEEEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQKSXQRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPHDNKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPIVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSPLDPSKDPRKSGIPLIAPNTKEKISNGTIKDERSLHADLTKNQKKKMRKKAKKAAQACVGMESPEEAEEDGKTPEQDECSKDVELSLESSEVNGSVGKDESTKASETKDDPQGSRGQRKSERKKLLASADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRQLRFWPLNKVLMEKYDFSEQDANDMAGFIIPLLDFVPDKRPTAAQCLTHPWLSTRPQTLKPSSTPVQPGEKDGETLEKTKEKAELEAVEVGIGNIAIDGAPKPVEMSQTIQQLSK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01947 540 MobiDBLite consensus disorder prediction 270 284 - -
Arst8g01947 540 Pfam Protein kinase domain 310 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01947 540 Pfam Protein kinase domain 41 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01947 540 MobiDBLite consensus disorder prediction 285 305 - -
Arst8g01947 540 Coils Coil 221 241 - -
Arst8g01947 540 CDD STKc_SRPK 30 477 - -
Arst8g01947 540 Gene3D Transferase(Phosphotransferase) domain 1 126 478 - -
Arst8g01947 540 ProSitePatterns Protein kinases ATP-binding region signature. 47 72 IPR017441 GO:0005524
Arst8g01947 540 Gene3D Phosphorylase Kinase; domain 1 17 125 - -
Arst8g01947 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Arst8g01947 540 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 11 494 - -
Arst8g01947 540 FunFam CMGC/SRPK protein kinase 27 128 - -
Arst8g01947 540 MobiDBLite consensus disorder prediction 209 225 - -
Arst8g01947 540 MobiDBLite consensus disorder prediction 479 507 - -
Arst8g01947 540 MobiDBLite consensus disorder prediction 208 305 - -
Arst8g01947 540 SUPERFAMILY Protein kinase-like (PK-like) 36 491 IPR011009 -
Arst8g01947 540 MobiDBLite consensus disorder prediction 479 494 - -
Arst8g01947 540 ProSiteProfiles Protein kinase domain profile. 41 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01947 540 SMART serkin_6 41 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01947 540 FunFam Serine/threonine-protein kinase SRPK-like protein 307 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01947 Arst-Chr8 27934195 27937633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01947 5 527 EF-hand Containing Proteins AT5G22840 69.476 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Arst8g01947 Pkinase 8.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01947 K08832 - gmx:100791829 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01947 8 27934195 27937633 Arst8g01947 8 27934195 27937633 ECH