Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01897 ATGAGTGGTTTAAGGCCTGATCATCAGTCTCCTCATCATGTAGCACAGCAAATTCGGCGTGATAAATTGAGAGTCCAGAACATTTCTCACCATCCACAATCACAGGATTTCCCCAACAATTTGGAACAATTCAACTTGGATCTTCTTCAAGTAAGGAATGTTAGAAATGCACACAACATGCTTGATGATGAGCCTCACCCACCACCACCAGGTGTTTATTCATCACAAGTGTCCAATTTCTTATCAACGCCTTTGAACCCTTTGGAGTATCACGAACTAGCTACTGTTGCAGCAGCTGAACAACCTAGTAGTAGTTGCAGTAGGGTAATGATGCATCAAAGTGAACTGCGCAGTTTGGGGAATTGGAGAAGCAGTGCTAACAGTAATCAAGGGTGTGATTGGTTTGTAAATTATGCATCAGGAAGCAGTTCTATGGCTAATAATGAAAGCAATAATCCCAACACTACTACTCATTTGGCTACTGAGATGAATAATGTGTCTTATAACCAGCACTATGAGAAGCCTAGTTGTTACAATGAATTCACAGATGTAATTGCTAATAGAGAAATTCAGAAGCAATTGGGAGGAGGAGTACTTCATCATCCTTCTTCTTCATCATCGTTGTCGCCTTTTTATCAGAATACTTTGCAGGATATTGTCAAGTCCGCTTCTATAAGTGCGCAAGGATCAGACAACATGGCCTTATTGATGCAGCAACCTGGCCATGGAATTTGGGTTGGAGATGGTAGTGGACTTGACCTTCATCCAAGCTATGGAAACCAACCGAATCAATTTCGTTGCGCCGGTGGTAATCCTTGGACGAATCGAACAGTTGACAACGCCCTTCGATGGAATAGTAGTCCACTTGGTTTCATAGACAAGAAGGATGATGAACACTCTGGACGACCTCTAATGAGCAATTCGAATCCTCAGAGCTTGTCTTTATCACTGTCATCAAATTCACAATCAAAGACTTCTGTGTCTCAATTTGAGCAAGTGTCTGCATCTGATGATCTTCAATGTAAGGATCCTCAGTACATGAAGTATGTAAGAGCTTTCATGAAGCCATCTATAGTTTCAAGAGATTCTGGGAAATCACCTCAAGATCCAGTGGGGGTGCCTTCAAGCACTAGCTATAGGAATGTAGGTCCCCTTGGCCCTTTCACTGGTTATGCTACTATTCTCAAGAGCTCAAGGTTCTTGAAATCAGCACAACAGTTATTGGATGAGTTCTGCCGTATATCTAGTCCAAGATTTTCAAAATCACGTGATGTCACACAAAGGTTATCTGGAGAAGCTAGTGCTTCTACTTCTACTGATGTTATCACTGTCGATAATCAAACTGAGGCTGCAGCAAAAGAAGGTAGCAATTCAGGTTCTTCATCTTCTATGTTCCATGGTGCAAATGAGAATAAAGCAGATTGGGGAACCGGGAGTGGTTCTTGTCTATCTCCTCGGCCAGATTACCAACAAAAGAAGGCAAGGCTCCTTTTCATGCAAGAGGAGGTTACAAGGAGATACAGGCAGTACCATCAACAAATGCAGATGGTTGTTTCATCCTTTGAGTCAGTAGCAGGTCTTAGTTCCGCCACTCCTTACATCTCCTTGGCTCTTAAGTCGGTATCGAGGCACTTCAAGTGCCTCAAAAATTCCATCTCAGATCAGCTCAAACATATAAGTGAAGTGTTGGGAGAGGATTTCTCAGTACCAAGAACCAGTACTTGTGGTAAAGATGACACCACTAGCATGGGAAGATTAAGTTGCATGGACCAAAGCTTTCAAAAGAACAAATCTGGGAGGGGTGGCACTGGCCTTGTTGAACCCCAGCAACATGTCTGGAGGCCCCAAAGAGGCTTGCCGGAACATTCTGTGGCAATTCTCAAAGCATGGTTGTTTGAGCATTTTCTTCACCCTTACCCCACAGACACTGATAAACACATGTTGGCAACACAAACAGGTCTTTCGCGAAACCAGGTGTCGAATTGGTTCATAAATGCTCGAGTCCGAGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACAAAAGGCACAACAGGTGCCAACAAGAACAACAACAACAATCACCCTGGTACTGAAAATGAGAGAGCTTGTGTTAATGAAGATGGTTCCAGCAGCCAACAGCATAGAGTAATAGAGGGGACTCAAAGCAAGTTCGACATGCATTCTTTGATTCCTGAGAACCAACAGCAGTCTCATCAGTGTATGGAACTTGAAATGGAGTCAACAACCAATGAAGAACAATGGAGCCAAGAGAAGAGGTCTAAATTGGAATGTGAGATGAGTTCAACAAGCATGGATGAAGGGTCACTGATGATGGGTTTTATGCCATATAGCAGGCGTGATCATCAGGTTGGTGGGCTTGGATCTGTGTCACTAACATTGGGTCTAAGGCATGGTGTTGAAGCTGTTGTGCAAAACCAACAGCAGCAACAACAGTTACAAGAGGAGCAGCTTAGGCGTCACTTTGGAGGACACATGATCCATGATTTTGTGGGCTGA 2526 0.4343 MSGLRPDHQSPHHVAQQIRRDKLRVQNISHHPQSQDFPNNLEQFNLDLLQVRNVRNAHNMLDDEPHPPPPGVYSSQVSNFLSTPLNPLEYHELATVAAAEQPSSSCSRVMMHQSELRSLGNWRSSANSNQGCDWFVNYASGSSSMANNESNNPNTTTHLATEMNNVSYNQHYEKPSCYNEFTDVIANREIQKQLGGGVLHHPSSSSSLSPFYQNTLQDIVKSASISAQGSDNMALLMQQPGHGIWVGDGSGLDLHPSYGNQPNQFRCAGGNPWTNRTVDNALRWNSSPLGFIDKKDDEHSGRPLMSNSNPQSLSLSLSSNSQSKTSVSQFEQVSASDDLQCKDPQYMKYVRAFMKPSIVSRDSGKSPQDPVGVPSSTSYRNVGPLGPFTGYATILKSSRFLKSAQQLLDEFCRISSPRFSKSRDVTQRLSGEASASTSTDVITVDNQTEAAAKEGSNSGSSSSMFHGANENKADWGTGSGSCLSPRPDYQQKKARLLFMQEEVTRRYRQYHQQMQMVVSSFESVAGLSSATPYISLALKSVSRHFKCLKNSISDQLKHISEVLGEDFSVPRTSTCGKDDTTSMGRLSCMDQSFQKNKSGRGGTGLVEPQQHVWRPQRGLPEHSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGTTGANKNNNNNHPGTENERACVNEDGSSSQQHRVIEGTQSKFDMHSLIPENQQQSHQCMELEMESTTNEEQWSQEKRSKLECEMSSTSMDEGSLMMGFMPYSRRDHQVGGLGSVSLTLGLRHGVEAVVQNQQQQQQLQEEQLRRHFGGHMIHDFVG 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01897 841 FunFam BEL1-like homeodomain protein 9 616 678 - -
Arst8g01897 841 Gene3D - 616 678 - -
Arst8g01897 841 MobiDBLite consensus disorder prediction 359 378 - -
Arst8g01897 841 MobiDBLite consensus disorder prediction 449 469 - -
Arst8g01897 841 MobiDBLite consensus disorder prediction 361 378 - -
Arst8g01897 841 ProSiteProfiles 'Homeobox' domain profile. 610 673 IPR001356 GO:0003677
Arst8g01897 841 SMART HOX_1 613 677 IPR001356 GO:0003677
Arst8g01897 841 CDD homeodomain 613 674 IPR001356 GO:0003677
Arst8g01897 841 SMART prehox3 389 554 IPR006563 -
Arst8g01897 841 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 294 696 - -
Arst8g01897 841 SUPERFAMILY Homeodomain-like 614 680 IPR009057 -
Arst8g01897 841 MobiDBLite consensus disorder prediction 293 320 - -
Arst8g01897 841 MobiDBLite consensus disorder prediction 685 712 - -
Arst8g01897 841 MobiDBLite consensus disorder prediction 303 320 - -
Arst8g01897 841 Pfam Associated with HOX 394 553 IPR006563 -
Arst8g01897 841 Pfam Homeobox KN domain 630 669 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01897 Arst-Chr8 27305540 27311778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01897 484 682 Homeobox Transcription Factor Family AT4G34610 54.774 5.34e-64 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst8g01897 POX 1.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01897 - - adu:107461750 1598.95