Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01895 ATGGCAAATAGTACATGTTCTAGCTCAAGTTCAATGAATTCAAAACAGAAGCCAATAAAAGAAAAGAGTGTGAAACAATTGACATTTGAAGCTAAGGAAGTCAATGACAATGAAGAGCACGATTTGGGAACTTCACACTTAGAAACAAAGAGAATGGATGCTCGTTGGTACCGGTCTCTGTTTCGAAAACCAAAAAATGGTAAGGTTGAGGTGCCTCAAAGGGTTCAACCTGATATCTTTAGAAACGAGACAGCACAAATGCCAGAGTCAAGGAATCCATTACTGGATGAAGATTTAGTTAGGAAGGATGTTGGGCATGATGGAGAAAAATCGACTCATTCTAAGAGAAATGGAATCATGTTGGACACGGGTTCAGATCTTTCTACCACATTGGCTGATGATGATGATTGCAACCTCATCCCTTCAAGGTTGCGTGACAATATTGTAGGGACTGGTGGGTCATGTTCCAAACGGAGAAGGTTGGATTGTGATCCTGTGGTCTCATCTAACCCTTCTACAACTGAGCTTCAGGATGGAGTTGATACTGATGCAAGTGTGTTGCAAAAGGAATATCCTGTAAATTCACCAAAAGAAGTCACAAAGCACACCTGTCTAATTTGCAAGAGTGGTGGACAGCTACTGTTTTGTGGTGGAAAAGGATGCAGCGGGTGCTACCATTCTTCTTGTCTTGAGCCACCCCTGGTCGATGCCTCCATTGGAGTTTGGTATTGCCATTTCTGTGTGAGGAAGAAGATTGAACTTGGTGTATATTCTGTATCGGAGGGAGTAGAATCAATTTGGGATGTCAAAGAAGTTTTGACATCAAATTCTGATGGGTCTACTCTTGCTCGGAAAGAATATCTAGTGAAATATAAAGGCGTTGCTCATGTTCATAATCGATGGATACCAGAAAATCAGTTACTTCGTGAAGCTCCTTCACTTCTTAAAAACTTTAATATGAAAAATCAGGACCGAAGGTTGAAGCTAGAATGGAGTCTACCTGATCGTCTGCTGCAGAAGAGAGCAATAATCCATTCCACACAGCAAGATGATCACAACATTAATGATGGAGTTCAAAACTTAAACTGTTGCTACGAATGGCTTGTGAAATGGCGTGGTCTTGGTTATGAGCATGCTACATGGGAGTTGGACAATGAGTTGTTTCTTCGTTCACCTGAAGGTCAGAGGTTAATCAGAGGCTATGAAGAGTGTTTCCAGAGAGCAAAGAGAGCAGCTTCTTGCTCCAGAGTAGATAATGTGCCACAGATTGATCAACTCAAGGAGCGGCCGTCAAGTCATATTGCATATAAGTGCAAGTCGGACTCTTTCAAGTTTATTGAGTATTGGGTTCCTGTCCAGATATCTCATGCGCAGCTTGAGCAGTATTGTGCTACTTTACATTCAAATGCTTCAATTCTTCGTTCATCAGCAAAGACGGATATCGATGCCCTTCGTGACATTATTATTACGGCCCGAAAGTGTTGTATTCATCCTTCTATTGTTGATCAAACACTGAAAAGTCGACTTACTGTTGGTCTTGATGAGGCTGAATTCATCGATGTTGATATAAAAGCAAGTGGCAAGCTGCAACTACTTGATTCGATGCTCATGGAGTTGAAGGCTAAAAGCTTAAGGGGTCTGATTCTTTTTAAGTCTATTGGTGGTTCTGGGAGGGTTTCTGCAGGAGATTTTTTGGATGACTTGTTACGGATAAGATTTGGTCCAAACTCGTATGAACGGGTTGACAAAGGTCTTTTAGTGTCCAAGCAGAAAGATGCCATGAGGAAATTTAACAACAAGGATGATGGACGGTTTGTTTTTCTGTTAGATGCATGTGCCTGCCGTCCAGGCATCAGATTATCATCACTGGATACTATTATTATATTTGACAGTGATTGGAACCCAACTAATGATATAAGATCCCTTCAGAAGATAACAATTGATTCACAGCCCCAAGTGATAAAAATATTCCGCTTATATTCAGCCTTCACTGTGGAAGAAAATGCCTTGATCCTTTCAAAGCAAGATAGGATACTTGACAGCAATTTACTGAACATAAGCAGGACTACCTGCCAAATGCTGTTGATGTGGGGAGCTGGTTCCCTATTTGATGATTTGAAAATTTTCCATCACAGTGAAACTTCTGTTTTGGGTCAGAAATCTTCATCTGGGCAACAACATCTGACAGAAACAGTCCGTGAATTATCATCAGTACTATCTCAGGACGTTGAAACAAGAAACTGTTCAGTTTTATTAAAAGTCAGGCAAAATGGGTCAACATACCGGGCAGATTTTCCTTTGCCTGGTGAGATGAAAAATAAGATACTGGAGGAAGAGCTTCCCCATATTTTTTGGACAAAACTTTTTGAGGGGAAACAGTTTAAGTGGAAGTACTCTTGTAGTTCATCTCAGCGGAGCCGAAAGAGAGTAGATCTTTTTGATGGTAGTGGAGGTATATCAAAAAAGCGCCGGAAAGTGAAAAGCAATCTTATGGACCAGCCTTCTTCAAAATCTGAAGGTTTTAAGTTATCTACTGGGATCAAGACAGATAGACTTGGATTTGATGATGTCGAACATGAGGAAACAACTAGACTGCGTGATGAGCAGAGGAGCTTATATCTTTCTCTGAAGCCAGAGATCAAAAAGCTTTGTGGTGTTCTTCTTCTCCCTATTTGGACTGTTGCTCCATTGCTAAAGCACAAAGTTGACCACAGGGATTCTCTTTTACTTGCAAAACAGCATTTGGATTTTGTCTGTAGGAAAGAAGAGGTGGATTATATCTACTCAGTTTTACGCTGTCTGAAGGGACTTTTTTTACATCGGATGGGAAATTCAAAGGATACTGGTTCTCCAAAATCTCCCGAGTCATCAAGGAAGGTTTATTCCAATAAAGAAGTAGCACAAGAGGTTGACTTGTTTAAAAATGATGTGTTCAGAAGTATTAGGGAAATACGGAAGAAGTGCCAAGAGCAGTTGAAGAAACTTAAACGGCTGCAACAAGAAGAGAAGGAAAGATTAGAAACAGCTTTTGAGGATGAAAAGGCTGAATTTGAGAAAAAGTACAAAATAGAGTCATTGGTTATTCGGACCTGCTCTCCAAATGATGTGATGAAGACAGAGAAGCTCAAAGTCTTGAACACTGAATTTGGTTCAAAAATTGAAGAACTAAAATGTGAGCATGAAACACGTCTAAAGGCTCTTGAGGACACACATATGGCTGCTAGGCAGAACTTCAAACATAGAGAAGATGCATGGGCACAAGATGTAGAGGATTGGGCAAAAAGTGAATTGTCAAACATAGATGCTTCAAAGGAACTTGGGACGGCAGTTGAATACACGCAGCTGTCTGATCAGGAAAATGCTCACAAGGGTTCAGAGAGTATGCCCCTTGTGTCTGATCATTTGACTGATGAGAAGGGTCATGATAATAACACAAATGAGGCCATGCCTAATGATGTTCAGGATGAAGTTCATTCTTCTACACACAATAAACTAGATGGGACTGTTTCAAGCCTGTCTTGTGAGAATGCCGTGCAAACTCATGGAGCTTATAATGGTTTGGATAATGCTACCACTGAAACTTCACATTTACCTAATGAAGGGATTGCTGATGGGGCCATGGCAGGCATAGTGAATAGAGATGCACCCAGAAAGCCTACCACCGTCACTGCTACTGATTGTCTGGAAAATGTTTCAGCTGATAGTCCTCCTCCATCTGTGGAGCAAGTAACTGATGGAGTTGCTTTAAATGAAATTTTAGATAGATGTGCCACCCCAGAAACTAGCCACGATCAGGGCAGAGTAAGCATATTGGGACGAGAGGTACCTGTGGAAGTGGAAACACATAGGATGGTCAATTTTAGTGAATGTCCCGTAAATGCTGCTGCTGTCAATCATTTCTCATCTGTGGATCAAACATCTGACAAAGGACCTATAAATGACCCAGATAGTACTGTCTCATCATTCAGGTGTTGTCAAGCTGATGGTCCTGATAAAAGTTCCCTTTCAAATCCACCTTTGGTACAACAATTTACTGATGTAGTCTCTTTGAATGAACCTGATGGAGATACTCATGAAGCGGCTGATTGTCATAATGATACAAGGCCTTCCACAGACACTTCTTCAGTGGATAAAAGTAGTATGATACCAGCCCAGCTGGAAGGAGTGCAGCAATCACCATCTCTGGAGGCCCCTCCTGCTCAGGATACTGCTGGAGAAGTGCAGAATTCTTCTGAAAGAGCTGAACTAGTACCTAATCTAGTTGGTGTTGTTCCAGCTAATCAATCAAATTCATGCATCCTGGAGCCTTCCGAGAATGGAGTTGAACATCAGCCGAACAGAAATGATCTCCCCCACCACGAAACAGAGGTTTCAGCTGTGGTTCCTAATCAGGATGTTGTGCAGGCTGACTCAAATTTAGAGCTTGGTTCACACTCGCAAGCAGTTGTGCACTCTGTCCTAAATTCAGGCCATGATTCACTTGGGCCAGTTGGAGTCATAAGAGAGGCTTCAAGTTCAAGCTTGAGAAATTTGTCAACTCCTTCAGAAATCAACAATCATCCTATACATACTGCAACTCATTCAGCTTCTAGAATGCCTCTGCCGTTGAGCGCCGATCCACTTAAAAATGAATTGGAAAGAATAAAAAAAATTATTGAACAACTGACCAAAAACCATGAAGAAATGAGATCTAAACTGAAGTCTGATTTCGAAAAGGAATTGGAGGCACTTCGTAGGAAGTATGATATTAAATTTCAATTGGTTGAGAATGAATTTCAACAAACGAAGAACAGGTTGGATTCAAGTTACCACACAGTTTTGGTAAATAAGATGTTGGCAGATTTTTTTCGGTCCAAATGCATGTATCGTAAAACATCTGATGCATATGGAGTGCAGCAAGATGCAGGTGTTGCCCAGCAGTCGATTCAGCTTGCAAGACAACAAAGTGCTACTTTTCCTTCCCAGGTTGTTGCTGGTTCATCTTCCCGGGGACCACTTTCTGCCAATCTTCATAGTCCATCTGCTTTGGTTAGCTCTCAGAATTCGCTCCCACCTTCAAATGTTACTTACAAGACACCAAGTCCTCCTGCAAGACTTCCTCTTAACTGCAATTCTTCACCCTCAGGGAATTTTCCGATTGCCAGTGAGATGCGAGCCCCGGCACCACATCTCCAGCCTTTTAGACCCTCGACACCTATGCTGGCTCCTAATCACCCTGCTCTCCTTCATGGGATGCCAAATCAGGCTGCACCTATTAACATACCTGCGATTGCTCCCACATTGTCTTGTGTTCCAGCCCAACCAACTCCACTGACATATCAGTCTGATCCTCAGATGGCCCACCAGCCGAATAGCTCTGTTGGAACTGGTGGGTTTTCCACCCTTAACTTACGGACCATCAGCTTACATGCGAATGCCAACACTCAATCTACTGTTTGTCTTCCAAGAGTTCAGCCAAGTATGTCAGAAGTGGTTTCTTTGAACCCACCCAGAATTGGCACCAGTGTTAATGTGACTCCTAACTCATCCAGTCAAGCTGCATCTCTTGAATTAGTCTGTTTATCAGACGATGAGTGA 5577 0.4198 MANSTCSSSSSMNSKQKPIKEKSVKQLTFEAKEVNDNEEHDLGTSHLETKRMDARWYRSLFRKPKNGKVEVPQRVQPDIFRNETAQMPESRNPLLDEDLVRKDVGHDGEKSTHSKRNGIMLDTGSDLSTTLADDDDCNLIPSRLRDNIVGTGGSCSKRRRLDCDPVVSSNPSTTELQDGVDTDASVLQKEYPVNSPKEVTKHTCLICKSGGQLLFCGGKGCSGCYHSSCLEPPLVDASIGVWYCHFCVRKKIELGVYSVSEGVESIWDVKEVLTSNSDGSTLARKEYLVKYKGVAHVHNRWIPENQLLREAPSLLKNFNMKNQDRRLKLEWSLPDRLLQKRAIIHSTQQDDHNINDGVQNLNCCYEWLVKWRGLGYEHATWELDNELFLRSPEGQRLIRGYEECFQRAKRAASCSRVDNVPQIDQLKERPSSHIAYKCKSDSFKFIEYWVPVQISHAQLEQYCATLHSNASILRSSAKTDIDALRDIIITARKCCIHPSIVDQTLKSRLTVGLDEAEFIDVDIKASGKLQLLDSMLMELKAKSLRGLILFKSIGGSGRVSAGDFLDDLLRIRFGPNSYERVDKGLLVSKQKDAMRKFNNKDDGRFVFLLDACACRPGIRLSSLDTIIIFDSDWNPTNDIRSLQKITIDSQPQVIKIFRLYSAFTVEENALILSKQDRILDSNLLNISRTTCQMLLMWGAGSLFDDLKIFHHSETSVLGQKSSSGQQHLTETVRELSSVLSQDVETRNCSVLLKVRQNGSTYRADFPLPGEMKNKILEEELPHIFWTKLFEGKQFKWKYSCSSSQRSRKRVDLFDGSGGISKKRRKVKSNLMDQPSSKSEGFKLSTGIKTDRLGFDDVEHEETTRLRDEQRSLYLSLKPEIKKLCGVLLLPDNVRDMVDNFLEFVVNNHHVNREREPVSMLQAFQISLIWTVAPLLKHKVDHRDSLLLAKQHLDFVCRKEEVDYIYSVLRCLKGLFLHRMGNSKDTGSPKSPESSRKVYSNKEVAQEVDLFKNDVFRSIREIRKKCQEQLKKLKRLQQEEKERLETAFEDEKAEFEKKYKIESLVIRTCSPNDVMKTEKLKVLNTEFGSKIEELKCEHETRLKALEDTHMAARQNFKHREDAWAQDVEDWAKSELSNIDASKELGTAVEYTQLSDQENAHKGSESMPLVSDHLTDEKGHDNNTNEAMPNDVQDEVHSSTHNKLDGTVSSLSCENAVQTHGAYNGLDNATTETSHLPNEGIADGAMAGIVNRDAPRKPTTVTATDCLENVSADSPPPSVEQVTDGVALNEILDRCATPETSHDQGRVSILGREVPVEVETHRMVNFSECPVNAAAVNHFSSVDQTSDKGPINDPDSTVSSFRCCQADGPDKSSLSNPPLVQQFTDVVSLNEPDGDTHEAADCHNDTRPSTDTSSVDKSSMIPAQLEGVQQSPSLEAPPAQDTAGEVQNSSERAELVPNLVGVVPANQSNSCILEPSENGVEHQPNRNDLPHHETEVSAVVPNQDVVQADSNLELGSHSQAVVHSVLNSGHDSLGPVGVIREASSSSLRNLSTPSEINNHPIHTATHSASRMPLPLSADPLKNELERIKKIIEQLTKNHEEMRSKLKSDFEKELEALRRKYDIKFQLVENEFQQTKNRLDSSYHTVLVNKMLADFFRSKCMYRKTSDAYGVQQDAGVAQQSIQLARQQSATFPSQVVAGSSSRGPLSANLHSPSALVSSQNSLPPSNVTYKTPSPPARLPLNCNSSPSGNFPIASEMRAPAPHLQPFRPSTPMLAPNHPALLHGMPNQAAPINIPAIAPTLSCVPAQPTPLTYQSDPQMAHQPNSSVGTGGFSTLNLRTISLHANANTQSTVCLPRVQPSMSEVVSLNPPRIGTSVNVTPNSSSQAASLELVCLSDDE 1895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01895 1895 Coils Coil 1015 1053 - -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1155 1205 - -
Arst8g01895 1895 CDD SF2_C_SNF 526 639 - -
Arst8g01895 1895 ProSiteProfiles Chromo and chromo shadow domain profile. 338 403 IPR000953 -
Arst8g01895 1895 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 254 IPR013083 -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1692 1730 - -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1692 1725 - -
Arst8g01895 1895 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 531 695 IPR001650 -
Arst8g01895 1895 Gene3D - 333 401 - -
Arst8g01895 1895 Gene3D - 255 328 - -
Arst8g01895 1895 SMART PHD_3 203 248 IPR001965 -
Arst8g01895 1895 Gene3D - 420 445 IPR038718 -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1 23 - -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1340 1415 - -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1367 1387 - -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1389 1403 - -
Arst8g01895 1895 Gene3D - 1575 1656 - -
Arst8g01895 1895 ProSiteProfiles Zinc finger PHD-type profile. 201 250 IPR019787 -
Arst8g01895 1895 PANTHER HELICASE PROTEIN MOM1 8 1895 IPR039322 GO:0031507
Arst8g01895 1895 SUPERFAMILY FYVE/PHD zinc finger 192 251 IPR011011 -
Arst8g01895 1895 SUPERFAMILY Chromo domain-like 364 403 IPR016197 -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1340 1361 - -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1 17 - -
Arst8g01895 1895 SMART chromo_7 260 323 IPR000953 -
Arst8g01895 1895 SMART chromo_7 330 406 IPR000953 -
Arst8g01895 1895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 685 IPR027417 -
Arst8g01895 1895 Coils Coil 1575 1609 - -
Arst8g01895 1895 Gene3D - 446 680 IPR027417 -
Arst8g01895 1895 ProSitePatterns Zinc finger PHD-type signature. 204 247 IPR019786 -
Arst8g01895 1895 SUPERFAMILY Chromo domain-like 220 325 IPR016197 -
Arst8g01895 1895 ProSiteProfiles Chromo and chromo shadow domain profile. 267 330 IPR000953 -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 103 122 - -
Arst8g01895 1895 MobiDBLite consensus disorder prediction 1427 1448 - -
Arst8g01895 1895 Pfam Chromo (CHRromatin Organisation MOdifier) domain 351 387 IPR023780 -
Arst8g01895 1895 Pfam Chromo (CHRromatin Organisation MOdifier) domain 267 319 IPR023780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01895 Arst-Chr8 27256253 27269053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01895 204 371 Core DNA Replication Machinery Family AT4G14700 28.000 2.00e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01895 - K11643 aip:107610432 3554.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01895 8 27256253 27269053 Arst8g01895 8 27256253 27269053 ECH
Arst8g01895 8 27256253 27269053 Arst3g00175 3 1257836 1265610 PCT