Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01889 ATGAAGTTTCAACTTAAACTTGCAGCTGTTCTTGCTATTAGCTTGCTATGGATTCAGCACTCATTTTGTGATGCTGAAGATAGTGAATCCTCATGGACATGCATATGTGATACCAATGGATTCCCTAAAGTGGCAGCAGGTGGCCATAGCTCTAGTTGCTTTAAATCCTGCAACTGCACCTGGGGAAGCAAAAGCGTTGCATTAGGTTCAAAGAAACACATTTCAACAAGGACTGTGATAGTAGTTGTGCTTTTAATATGTGTTGTATGCAGCACTCTTGCATTTATTGCCTCAGTTCTATACTATGTCTGCAAAAGAGACAGCTGTTCAATTCAATCACCAATGGTTTTATCAGATAAAGAAATAAGTTACAATAGTACCTCCAACTTAATTAGTCATAGAACATTTTCAGTTCCAGAAACAAAAGCTGCTATTCATTTTCCAGTGAGTCATATTGCAGGATGCTTTCAGAAGGCCTCTTTCTTGTTTGGGAGCCATAGAGAAACTTTTCATGGAAGTATCATTCGATTTTCGTTCTCTGAGCTGGAAAATGCCACTGGAAACTTCTCAACTTCCAACATAATTGGACTTGGTGGATGTAGTTATGTATACCGCGGACGACTTAAAGATGGAAGTAACGTGGCAGTTAAGCGATTAAAAGATGAAGGAGGACCTGAAGCAGACACTGAATTTTTCACTGAGATTGAACTATTGTCTAGGCTTCATCATTGTCATCTGGTGCCATTGCTTGGATACTGCTCAGAATTAAAAGGGAAAAATGTTCATAGGTTACTAGTGTTTGAGTACATGCCTAATGGGAATTTGAGGGACCGTTTGGATGGAGTTTTTGGAAAGAACATGGGTTGGTCTACTCGGGTAAATATCGCATTGGGAGCTGCCAGGGGTTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTGCATAGAGATGTCAAATCAACCAACATTCTTCTTGATGAAAATTGGCATGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGATAGCTGATGACATACTCAGTTGTCCTGGCTCTCCAGAGAGAATGCAGGGCACATTCGGGTATTTCGCACCCGAGTATGCAATTGTTGGGAGAGCTTCTCTTGAATCTGATGTATTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGTGGCCAGCAACCAATCCTTAGATCAGCAGGCAGAGAAGAAAGCCTTGTTATATGGGCCACTCCTCTCTTGCAAGATAGCAGGAGACTAATCACAGAGTTGATCGATCCGCGATTGAAAGGAAACTTCCCAGAAGAAGAGGTGAAGGTAATGGCATACTTAGCAAAAGAGTGTTTGCTGTTGGATCCTGACACAAGACCAACCATGAGTGAGGTTGTTCAAATTCTTTCAAGTATTTCCCCAGGAAAATCTAGAAGAAGAATAAGCATTCCACTTAGCCTTTTTCAGGAATCAGAGGATGCAGAGAAGGCAAGGCAAGCTTCTTCGTCGGCCAGATTCGCTTATTGTAATTTCATGTCACAAGATACTGAAAACAATCTTCATGTTGTTGGGAATGAAAATGAAAATGTAGATGCATTTTCAACTGAGTATATGGAGAGTTTGATCCTCTTGACTTCAAAAATTCCTGAGAGCTGGCATGCATCAGAAGAGGAAATGGTAGACCTAACTGAACCGCGGTTCGAATCGTTTTCCTTGATGACATTAACATAG 1728 0.4086 MKFQLKLAAVLAISLLWIQHSFCDAEDSESSWTCICDTNGFPKVAAGGHSSSCFKSCNCTWGSKSVALGSKKHISTRTVIVVVLLICVVCSTLAFIASVLYYVCKRDSCSIQSPMVLSDKEISYNSTSNLISHRTFSVPETKAAIHFPVSHIAGCFQKASFLFGSHRETFHGSIIRFSFSELENATGNFSTSNIIGLGGCSYVYRGRLKDGSNVAVKRLKDEGGPEADTEFFTEIELLSRLHHCHLVPLLGYCSELKGKNVHRLLVFEYMPNGNLRDRLDGVFGKNMGWSTRVNIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWHAKITDLGMAKNLIADDILSCPGSPERMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGQQPILRSAGREESLVIWATPLLQDSRRLITELIDPRLKGNFPEEEVKVMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRISIPLSLFQESEDAEKARQASSSARFAYCNFMSQDTENNLHVVGNENENVDAFSTEYMESLILLTSKIPESWHASEEEMVDLTEPRFESFSLMTLT 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01889 575 SUPERFAMILY Protein kinase-like (PK-like) 169 468 IPR011009 -
Arst8g01889 575 FunFam receptor-like serine/threonine-protein kinase NCRK 163 269 - -
Arst8g01889 575 Gene3D Phosphorylase Kinase; domain 1 164 269 - -
Arst8g01889 575 PANTHER OS01G0750732 PROTEIN 32 490 - -
Arst8g01889 575 Pfam Protein kinase domain 190 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01889 575 SMART serkin_6 189 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01889 575 Gene3D Transferase(Phosphotransferase) domain 1 270 482 - -
Arst8g01889 575 FunFam receptor-like serine/threonine-protein kinase NCRK 270 480 - -
Arst8g01889 575 ProSiteProfiles Protein kinase domain profile. 189 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01889 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Arst8g01889 575 CDD STKc_IRAK 195 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01889 Arst-Chr8 27158780 27162394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01889 23 571 Receptor kinase-like Gene Family AT2G28250 53.069 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Arst8g01889 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01889 - - gmx:100499641 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01889 8 27158780 27162394 Arst3g00179 3 1295502 1302870 PCT