Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01888 ATGAAGTTTCAACTTAAACTTGCAGCTGTTCTTGCTATTAGCTTGCTATGGATTCAGCACTCATTTTGTGGATTACCTTCTGAGACTTACCTAAACAAGTGGAAATGTAGATGTTCTTCTTTCCAAAGGAACCATATATACTCTCTTTCTAATTGTTCTCACTCATGTGATTGCCATTCAGATGCTGAAGATAGTGAATCCTCATGGACATGCATATGTGATACCAATGGATTCCCTAAAGTGGCAGCAGGTGGCCATAGCTCTAGTTGCTTTAAATCCTGCAACTGCACCTGGGGAAGCAAAAGCGTTGCATTAGGTTCAAAGAAACACATTTCAACAAGGACTGTGATAGTAGTTGTGCTTTTAATATGTGTTGTATGCAGCACTCTTGCATTTATTGCCTCAGTTCTATACTATGTCTGCAAAAGAGACAGCTGTTCAATTCAATCACCAATGGTTTTATCAGATAAAGAAATAAGTTACAATAGTACCTCCAACTTAATTAGTCATAGAACATTTTCAGTTCCAGAAACAAAAGCTGCTATTCATTTTCCAGTGAGTCATATTGCAGGATGCTTTCAGAAGGCCTCTTTCTTGTTTGGGAGCCATAGAGAAACTTTTCATGGAAGTATCATTCGATTTTCGTTCTCTGAGCTGGAAAATGCCACTGGAAACTTCTCAACTTCCAACATAATTGGACTTGGTGGATGTAGTTATGTATACCGCGGACGACTTAAAGATGGAAGTAACGTGGCAGTTAAGCGATTAAAAGATGAAGGAGGACCTGAAGCAGACACTGAATTTTTCACTGAGATTGAACTATTGTCTAGGCTTCATCATTGTCATCTGGTGCCATTGCTTGGATACTGCTCAGAATTAAAAGGGAAAAATGTTCATAGGTTACTAGTGTTTGAGTACATGCCTAATGGGAATTTGAGGGACCGTTTGGATGGAGTTTTTGGAAAGAACATGGGTTGGTCTACTCGGGTAAATATCGCATTGGGAGCTGCCAGGGGTTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTGCATAGAGATGTCAAATCAACCAACATTCTTCTTGATGAAAATTGGCATGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGATAGCTGATGACATACTCAGTTGTCCTGGCTCTCCAGAGAGAATGCAGGGCACATTCGGGTATTTCGCACCCGAGTATGCAATTGTTGGGAGAGCTTCTCTTGAATCTGATGTATTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGTGGCCAGCAACCAATCCTTAGATCAGCAGGCAGAGAAGAAAGCCTTGTTATATGGGCCACTCCTCTCTTGCAAGATAGCAGGAGACTAATCACAGAGTTGATCGATCCGCGATTGAAAGGAAACTTCCCAGAAGAAGAGGTGAAGGTAATGGCATACTTAGCAAAAGAGTGTTTGCTGTTGGATCCTGACACAAGACCAACCATGAGTGAGGTTGTTCAAATTCTTTCAAGTATTTCCCCAGGAAAATCTAGAAGAAGAATAAGCATTCCACTTAGCCTTTTTCAGGAATCAGAGGATGCAGAGAAGGCAAGGCAAGCTTCTTCGTCGGCCAGATTCGCTTATTGTAATTTCATGTCACAAGATACTGAAAACAATCTTCATGTTGTTGGGAATGAAAATGAAAATGTAGATGCATTTTCAACTGAGTATATGGAGAGTTTGATCCTCTTGACTTCAAAAATTCCTGAGAGCTGGCATGCATCAGAAGAGGAAATGGTAGACCTAACTGAACCGCGGTTCGAATCGTTTTCCTTGATGACATTAACATAG 1839 0.4057 MKFQLKLAAVLAISLLWIQHSFCGLPSETYLNKWKCRCSSFQRNHIYSLSNCSHSCDCHSDAEDSESSWTCICDTNGFPKVAAGGHSSSCFKSCNCTWGSKSVALGSKKHISTRTVIVVVLLICVVCSTLAFIASVLYYVCKRDSCSIQSPMVLSDKEISYNSTSNLISHRTFSVPETKAAIHFPVSHIAGCFQKASFLFGSHRETFHGSIIRFSFSELENATGNFSTSNIIGLGGCSYVYRGRLKDGSNVAVKRLKDEGGPEADTEFFTEIELLSRLHHCHLVPLLGYCSELKGKNVHRLLVFEYMPNGNLRDRLDGVFGKNMGWSTRVNIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWHAKITDLGMAKNLIADDILSCPGSPERMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGQQPILRSAGREESLVIWATPLLQDSRRLITELIDPRLKGNFPEEEVKVMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRISIPLSLFQESEDAEKARQASSSARFAYCNFMSQDTENNLHVVGNENENVDAFSTEYMESLILLTSKIPESWHASEEEMVDLTEPRFESFSLMTLT 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01888 612 SUPERFAMILY Protein kinase-like (PK-like) 206 505 IPR011009 -
Arst8g01888 612 CDD STKc_IRAK 232 508 - -
Arst8g01888 612 Gene3D Transferase(Phosphotransferase) domain 1 307 519 - -
Arst8g01888 612 Gene3D Phosphorylase Kinase; domain 1 201 306 - -
Arst8g01888 612 Pfam Protein kinase domain 227 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01888 612 SMART serkin_6 226 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01888 612 PANTHER OS01G0750732 PROTEIN 32 527 - -
Arst8g01888 612 ProSiteProfiles Protein kinase domain profile. 226 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01888 612 FunFam receptor-like serine/threonine-protein kinase NCRK 200 306 - -
Arst8g01888 612 FunFam receptor-like serine/threonine-protein kinase NCRK 307 517 - -
Arst8g01888 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01888 Arst-Chr8 27158780 27162395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01888 1 608 Receptor kinase-like Gene Family AT2G28250 51.140 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Arst8g01888 Pkinase 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01888 - - gmx:100499641 886.33