Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01887 ATGGGTTTTGGTAATTCAAGATCTGTAAGATTTGAGGATGATCTGGAGCTACCAAATAACAAGAGTGAAAGTAAGAATGGTATGAAGGTCAAATACCACATTGATGGAACACAAATAGCAGAGGCTAGTTCCAACAAAAAGGCAGGGAATAAGTTCTTGAAAGGTAGAGTTTTATCAAGAGTGTTCTCAGAGGATTATGAGAGAGTTAAAAGAAGAAAAATAATCTTAGATCCTCGCGGCCAAGCGATCCACAGGTGGAACAAGATCTTCTTGGTGGCAAGCTTGGTGTCTTTGTTTGTGGACCCTTTGTTCTTCTACTTGCCAGTGGTTCAAGATGAAGTGTGCATTGACATTGGAGTAACACTTGAAGTTGCCCTTACTTTGATAAGAACAGTTGGTGATGCCTTCTATGTCATTCAGATTTTCGCCAAGTTTCGCACTGCTTATGTAGCTCCTTCTTCAAGAGTTTTTGGAAGAGGTGAACTTGTCATAGACACTTCCAAGATTGCAGTTAAGTACCTTTTCAAGGGATTTTGGTTAGACTTTCTTGCTGCCCTGCCTATTCCTCAGGTGCTAATTTGGATTATCATCCCAACTCTTAGGGGTTCAACCATGGCAAACACAAAGAATGTGCTTCGGTTTTTCATCATCTTCCAGTATGTTCCAAGGCTATATTTGATTTTCCCACTCTCTTCACAAATTGTAAGTGCTACTGGGGTTGTCACAGAAACAGCATGGGCTGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCAAGCCATATTTTAGGAGCTTGCTGGTACCTTCTGTCAATAGAAAGGCAAGAAGCATGTTGGAGAAATGTATGCAATGTTGAGAAGCCATTTTGTGAATATGCATTCTTTGACTGCCGCAGGGTTGGAAATTCCAAAAGAGACTTATGGTTTCTAGCAAGTAACATCACAAACCTCTGCTCACCAGATTCTAACTTCTATCAGTTTGGTATATATGCTGATGCTGTCACTTCTCAAGTTACATCCTCATCATTCTTCAACAAGTACTTCTTTTGTCTTTGGTGGGGCCTTAGGAATCTCAGTTCATTGGGACAAGGCCTTCTTACTAGCACTTTTGTTGGAGAAATTATGGTTGCCATTGTTGTTGCAACACTTGGATTGGTTCTTTTTGCATTACTCATTGGTAATATGCAGACATACCTGCAATCAACTACTGTGCGGTTAGAAGAGTGGAGGGTGAAAAGAACAGACACAGAACAATGGATGCATCACAGGCAACTACCACAAGAACTTAGACAATCTGTGAGAAAATATGATCAATACAAATGGATGGCTACTAGGGGAGTTGATGAAGAAGCTCTTCTCAAAGGTCTTCCATTAGATCTTCGTAGAGACATCAAGCGCCACCTTTGTCTTGACCTTGTTCGAGGAGTACCATTGTTTGACCAAATGGATGAGAGCATGCTAGATGCAATATGTGAAAGACTAAAACCAGCATTATGCACTGAAGGAACTTACCTTGTAAGAGAAGGGGATCCAGTGAATGAAATGCTGTTCATAATAAGAGGGCACCTTGACTCTTACACAACCAATGGTGGCAGAGCTGGATTCTTCAACTCGTGCCGTATTGGGCCTGGTGATTTCTGTGGGGAGGAGCTTCTAACTTGGGCCTTGGACCCAAGGCCCAGTGTTATTCTCCCTTCTTCAACAAGAACTGTTAAGGCCTTCTCAGAAGTTGAGGCTTTTGCACTCATTGCTGAAGATCTTAAATTTGTTGCATCTCAGTTTAGAAGGCTGCATAGTAAGCAACTTAGGCACAAGTTCAGATTCTATTCACACCAATGGAGAACTTGGGCTGCATGTTTCATTCAAGCTGCTTGGAGAAGGCATAAGAAGAGAAAGGATCTTGCTGGACTAAGAGCAAAGGAGAATAATAATAATAATCATATTAATAATAATAATAATGATTATGTAACAGTTTCTGAGCCTGAGACTCCAACATCAAAGGCTGTGATGATGAGTGGTAGGAAAAGTGTTAGTAGGTCAGATTCTGGTGTAGTTAGCTCTGTGCAGAAGCCAGCTGAGCCTGACTTTTCGGTTGATGAATGA 2103 0.4132 MGFGNSRSVRFEDDLELPNNKSESKNGMKVKYHIDGTQIAEASSNKKAGNKFLKGRVLSRVFSEDYERVKRRKIILDPRGQAIHRWNKIFLVASLVSLFVDPLFFYLPVVQDEVCIDIGVTLEVALTLIRTVGDAFYVIQIFAKFRTAYVAPSSRVFGRGELVIDTSKIAVKYLFKGFWLDFLAALPIPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYVPRLYLIFPLSSQIVSATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWRNVCNVEKPFCEYAFFDCRRVGNSKRDLWFLASNITNLCSPDSNFYQFGIYADAVTSQVTSSSFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMVAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWMATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRGVPLFDQMDESMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKDLAGLRAKENNNNNHINNNNNDYVTVSEPETPTSKAVMMSGRKSVSRSDSGVVSSVQKPAEPDFSVDE 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01887 700 ProSiteProfiles cAMP/cGMP binding motif profile. 478 563 IPR000595 -
Arst8g01887 700 SUPERFAMILY Voltage-gated potassium channels 78 400 - -
Arst8g01887 700 Pfam Ion transport protein 86 405 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst8g01887 700 PRINTS EAG/ELK/ERG potassium channel family signature 441 448 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g01887 700 PRINTS EAG/ELK/ERG potassium channel family signature 141 150 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g01887 700 PRINTS EAG/ELK/ERG potassium channel family signature 347 364 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g01887 700 PRINTS EAG/ELK/ERG potassium channel family signature 391 400 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g01887 700 PRINTS EAG/ELK/ERG potassium channel family signature 258 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Arst8g01887 700 Gene3D Jelly Rolls 476 596 IPR014710 -
Arst8g01887 700 FunFam Cyclic nucleotide-gated ion channel 1 405 469 - -
Arst8g01887 700 CDD CAP_ED 478 609 IPR000595 -
Arst8g01887 700 MobiDBLite consensus disorder prediction 640 687 - -
Arst8g01887 700 SMART cnmp_10 478 609 IPR000595 -
Arst8g01887 700 Gene3D Helix hairpin bin 405 469 - -
Arst8g01887 700 SUPERFAMILY cAMP-binding domain-like 408 604 IPR018490 -
Arst8g01887 700 Gene3D - 89 402 - -
Arst8g01887 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 60 696 - -
Arst8g01887 700 MobiDBLite consensus disorder prediction 640 700 - -
Arst8g01887 700 FunFam Cyclic nucleotide-gated ion channel 1 476 594 - -
Arst8g01887 700 ProSiteProfiles IQ motif profile. 614 643 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01887 Arst-Chr8 27152406 27155860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01887 48 699 Ion Channels AT2G28260 75.767 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01887 K05391 - gmx:100786868 1147.11