Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01853 ATGACGAAGGATGTTGAGGTAGCAGAGCAAGGGCAAGGAGGAGAGTACAGTGCAAAAGACTATAATGACCCTCCACCGGCGCCATTGATAGACTTTGAGGAGCTGAAAAAGTGGTCTTTGTACAGAGCAGTGATTGCTGAGTTCGTAGCAACGCTTCTATTCCTTTATATAACGGTTTTGACCATCATAGGTTACAAGCATCAGACGGACCCAAACGTTGCTGGTACCAATCAGTGTGACGGCGTTGGAATCTTGGGTATTGCATGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACGGCAGGAATCTCTGGTGGACATATCAACCCGGCGGTGACATTTGGGTTGTTCGTGGGGCAGAAACTATCACTAATAAGGACACTGCTGTACATGATTGGGCAATGCGCCGGTGCCATCTGCGGTGCCGGACTTGCCAAGGGGTTTCAGAAATCGTTCTACAACAGATACGGTGGTGGTGCCAACACCGTCAGCCACGGGTATAACAAAGGCACTGCTCTAGGTGCTGAGATTATCGGCACCTTCGTCCTTGTGTACACCGTGTTCTCTGCCACTGATCCCAAGAGGAACGCCAGGGACTCCCATGTTCCAGTGTTGGCACCACTCCCCATTGGATTCGCCGTCTTCATGGTTCACTTGGCCACTATCCCTATCACTGGTACTGGAATTAACCCTGCAAGGAGTTTTGGACCCGCTGTTATCTTCAACAATGATAAAGCTTGGGATGACCAGTGGATTTACTGGGTTGGACCCTTCGTTGGAGCAGCAGCAGCAGCAATCTACCACCAACACATTCTTAGAGCAGCAGCAATCAAAGCTCTTGGATCCTTCAGGAGCAACGCTTAA 870 0.5 MTKDVEVAEQGQGGEYSAKDYNDPPPAPLIDFEELKKWSLYRAVIAEFVATLLFLYITVLTIIGYKHQTDPNVAGTNQCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFVGQKLSLIRTLLYMIGQCAGAICGAGLAKGFQKSFYNRYGGGANTVSHGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAAAAIYHQHILRAAAIKALGSFRSNA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01853 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 278 IPR034294 -
Arst8g01853 289 MobiDBLite consensus disorder prediction 1 22 - -
Arst8g01853 289 FunFam Probable aquaporin PIP1-2 27 289 - -
Arst8g01853 289 Pfam Major intrinsic protein 34 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 NCBIfam MIP family channel protein 46 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 ProSitePatterns MIP family signature. 109 117 IPR022357 -
Arst8g01853 289 CDD MIP 42 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 SUPERFAMILY Aquaporin-like 33 275 IPR023271 -
Arst8g01853 289 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 PRINTS Major intrinsic protein family signature 128 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 PRINTS Major intrinsic protein family signature 91 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 PRINTS Major intrinsic protein family signature 42 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 PRINTS Major intrinsic protein family signature 213 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01853 289 Gene3D Glycerol uptake facilitator protein. 27 289 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01853 Arst-Chr8 26848947 26850858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01853 1 287 Major Intrinsic Protein MIP AT5G60660 77.700 3.25e-166 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01853 K09872 - gmx:732581 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01853 8 26848947 26850858 Arst8g01853 8 26848947 26850858 ECH
Arst8g01853 8 26848947 26850858 Arst3g00213 3 1506990 1509165 PCT