Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01842 ATGACTATTCAGAAGAAATATGATGCTGCTGCAGAAACTCTTTCATGCAAACGAACACTTTCACTTCCACTTCACGGGTTTGATGATTCAATGGGGTTGAATGAAGAAACTACAGATGTTCATGATTGGAAAGAACAGAATCTTGTGGCGGATATAGCATCATCAAGAACATGTTCATCATCAGAAGATGCAAAATCTCAGGATTATGTAGCCATAAAGATGCCATTGACACCAAGTCCAACTCCAACTCATAAGAGAGTCAATTTTCTTGTGACTTCTCGTTCTGTTGATGCCCCAATAAATACTACTTCTTCTTCTTCTTCTTCATCATCATCTTCTTCAGGACCCTCATCTAGAACTAAATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCCATAAGAAACATATTGCCAAAATTCACCTTAAGGAATCATAGGACACCGAATTCGGATATCGAAAAGGCTAATATTTTAGCTCCAGAATGTTCCTCTTTAGATCATCATCAAGAGAAAGACAAGTCTTCTTCAATCTCAAGATCGGTGTCTCTCACTAAGATGTTCACAACTAAGATCAAGAGAACTTCATCATTACCTGTAGAAGAATTGGGTCATGCAAACACAGATTCTGTTCAGGCTGCAATTCTTGGTGGTTCTCCATGTAGGATAGAGACTCAGGGGATGATAGCTCGGTCTCGTTCAGTACCTATCAATACCAAAGAAAAAGGCCATAGGAGAATGGATTCATTCTTCCGTGTTGTTCCTTCCACTCCTCTATTAAAAGAAGGGAATGATTGGTTAACCAAGTACACAACAAAAGATACTGAAAATGGAGATGATGATGATGATGATGGAGAAGATATAGCTGAAGAAGAAGCTGTGTGCAGAATATGTCTGATTGATCTGTGTGAAGGAGGGGAGACACTGAAGATGGAATGCAGCTGCAAAGGTGAACTTGCTCTTGCTCACAAAGACTGTGCCATTAAATGGTTCACTATCAAGGGCAACAAGACCTGTGATGTTTGTAAGGAGGAGGTTAGGAACCTTTCTGTCACTCTCTTACGCATCCGAAATGTTCAAACTCAGAATAATCCTGGAGCAAGCTCTCAGCACCATGATGATTACAGGTTTTGGCAGGAACTGCCAGTGCTTGTGATTGTAAGCATGCTTGCCTATTTCTGTTTCCTTGAACAGTTATTGGTTGGTGAAATGGGGCACAATGCAATTTCCATATCTCTTCCATTTTCTTGTGTATTAGGCCTACTGTCTGCCATGACATCAACCACCATGGTGAAGAGCAAGTTCACATGGGTTTATGCATCTGTCCAATTAGTTCTGGTGGCTCTCTTTGCACACATATTTTACTCCCTGAATGGTCAATTTCAGGTTACCAAGAGAGCAATTCTGTCAATAATTCTTGCAACATTTGCTGGGTTTAGTGTGGTGATGAGTGGAAGTTCAATTATTGGTGAGATTCTTAGATGGAGGAGAACTTGGCAGCAACAACAACAACAACAACAACAACAACAAAGTGGAGGAGTGCAAAATCAACACAACTCAAATCACACCTGA 1584 0.4021 MTIQKKYDAAAETLSCKRTLSLPLHGFDDSMGLNEETTDVHDWKEQNLVADIASSRTCSSSEDAKSQDYVAIKMPLTPSPTPTHKRVNFLVTSRSVDAPINTTSSSSSSSSSSSGPSSRTKSSSSSSSSSSSSSSSSIRNILPKFTLRNHRTPNSDIEKANILAPECSSLDHHQEKDKSSSISRSVSLTKMFTTKIKRTSSLPVEELGHANTDSVQAAILGGSPCRIETQGMIARSRSVPINTKEKGHRRMDSFFRVVPSTPLLKEGNDWLTKYTTKDTENGDDDDDDGEDIAEEEAVCRICLIDLCEGGETLKMECSCKGELALAHKDCAIKWFTIKGNKTCDVCKEEVRNLSVTLLRIRNVQTQNNPGASSQHHDDYRFWQELPVLVIVSMLAYFCFLEQLLVGEMGHNAISISLPFSCVLGLLSAMTSTTMVKSKFTWVYASVQLVLVALFAHIFYSLNGQFQVTKRAILSIILATFAGFSVVMSGSSIIGEILRWRRTWQQQQQQQQQQQSGGVQNQHNSNHT 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01842 527 MobiDBLite consensus disorder prediction 98 138 - -
Arst8g01842 527 CDD RING_CH-C4HC3_MARCH 299 347 - -
Arst8g01842 527 Pfam RING-variant domain 299 346 IPR011016 GO:0008270
Arst8g01842 527 SUPERFAMILY RING/U-box 295 350 - -
Arst8g01842 527 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 356 IPR013083 -
Arst8g01842 527 PANTHER OS02G0165000 PROTEIN 36 515 - -
Arst8g01842 527 SMART ringv_2 298 347 IPR011016 GO:0008270
Arst8g01842 527 ProSiteProfiles Zinc finger RING-CH-type profile. 291 353 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01842 Arst-Chr8 26803443 26806391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01842 285 354 C3H Transcription Factor Family AT2G37950 46.479 4.71e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01842 - - gmx:100815599 555.444