Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01841 ATGACTATTCAGAAGAAATATGATGCTGCTGCAGAAACTCTTTCATGCAAACGAACACTTTCACTTCCACTTCACGGGTTTGATGATTCAATGGGGTTGAATGAAGAAACTACAGATGTTCATGATTGGAAAGAACAGAATCTTGTGGCGGATATAGCATCATCAAGAACATGTTCATCATCAGAAGATGCAAAATCTCAGGATTATGTAGCCATAAAGATGCCATTGACACCAAGTCCAACTCCAACTCATAAGAGAGTCAATTTTCTTGTGACTTCTCGTTCTGTTGATGCCCCAATAAATACTACTTCTTCTTCTTCTTCTTCATCATCATCTTCTTCAGGACCCTCATCTAGAACTAAATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCCATAAGAAACATATTGCCAAAATTCACCTTAAGGAATCATAGGACACCGAATTCGGATATCGAAAAGGCTAATATTTTAGCTCCAGAATGTTCCTCTTTAGATCATCATCAAGAGAAAGACAAGTCTTCTTCAATCTCAAGATCGGTGTCTCTCACTAAGATGTTCACAACTAAGATCAAGAGAACTTCATCATTACCTGTAGAAGAATTGGGTCATGCAAACACAGATTCTGTTCAGGCTGCAATTCTTGGTGGTTCTCCATGTAGGATAGAGACTCAGGGGATGATAGCTCGGTCTCGTTCAGTACCTATCAATACCAAAGAAAAAGGCCATAGGAGAATGGATTCATTCTTCCGTGTTGTTCCTTCCACTCCTCTATTAAAAGAAGGGAATGATTGGTTAACCAAGTACACAACAAAAGATACTGAAAATGGAGATGATGATGATGATGATGGAGAAGATATAGCTGAAGAAGAAGCTGTGTGCAGAATATGTCTGATTGATCTGTGTGAAGGAGGGGAGACACTGAAGATGGAATGCAGCTGCAAAGGTGAACTTGCTCTTGCTCACAAAGACTGTGCCATTAAATGGTTCACTATCAAGGGCAACAAGACCTGTGATGTTTGTAAGGAGGAGGTTAGGAACCTTTCTGTCACTCTCTTACGCATCCGAAATGTTCAAACTCAGAATAATCCTGGAGCAAGCTCTCAGCACCATGATGATTACAGGTTTTGGCAGGAACTGCCAGTGCTTGTGATTGTAAGCATGCTTGCCTATTTCTGTTTCCTTGAACAGTTATTGGTTGGTGAAATGGGGCACAATGCAATTTCCATATCTCTTCCATTTTCTTGTGTATTAGGCCTACTGTCTGCCATGACATCAACCACCATGGTGAAGAGCAAGTTCACATGGGTTTATGCATCTGTCCAATTAGTTCTGGTGGCTCTCTTTGCACACATATTTTACTCCCTGGTTACCAAGAGAGCAATTCTGTCAATAATTCTTGCAACATTTGCTGGGTTTAGTGTGGTGATGAGTGGAAGTTCAATTATTGGTGAGATTCTTAGATGGAGGAGAACTTGGCAGCAACAACAACAACAACAACAACAACAACAAAGTGGAGGAGTGCAAAATCAACACAACTCAAATCACACCTGA 1569 0.4028 MTIQKKYDAAAETLSCKRTLSLPLHGFDDSMGLNEETTDVHDWKEQNLVADIASSRTCSSSEDAKSQDYVAIKMPLTPSPTPTHKRVNFLVTSRSVDAPINTTSSSSSSSSSSSGPSSRTKSSSSSSSSSSSSSSSSIRNILPKFTLRNHRTPNSDIEKANILAPECSSLDHHQEKDKSSSISRSVSLTKMFTTKIKRTSSLPVEELGHANTDSVQAAILGGSPCRIETQGMIARSRSVPINTKEKGHRRMDSFFRVVPSTPLLKEGNDWLTKYTTKDTENGDDDDDDGEDIAEEEAVCRICLIDLCEGGETLKMECSCKGELALAHKDCAIKWFTIKGNKTCDVCKEEVRNLSVTLLRIRNVQTQNNPGASSQHHDDYRFWQELPVLVIVSMLAYFCFLEQLLVGEMGHNAISISLPFSCVLGLLSAMTSTTMVKSKFTWVYASVQLVLVALFAHIFYSLVTKRAILSIILATFAGFSVVMSGSSIIGEILRWRRTWQQQQQQQQQQQSGGVQNQHNSNHT 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01841 522 MobiDBLite consensus disorder prediction 98 138 - -
Arst8g01841 522 CDD RING_CH-C4HC3_MARCH 299 347 - -
Arst8g01841 522 Pfam RING-variant domain 299 346 IPR011016 GO:0008270
Arst8g01841 522 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 356 IPR013083 -
Arst8g01841 522 PANTHER OS02G0165000 PROTEIN 36 510 - -
Arst8g01841 522 SUPERFAMILY RING/U-box 295 350 - -
Arst8g01841 522 SMART ringv_2 298 347 IPR011016 GO:0008270
Arst8g01841 522 ProSiteProfiles Zinc finger RING-CH-type profile. 291 353 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01841 Arst-Chr8 26803442 26806391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01841 285 354 C3H Transcription Factor Family AT2G37950 46.479 4.65e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01841 - - gmx:100815599 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01841 8 26803442 26806391 Arst8g01841 8 26803442 26806391 ECH
Arst8g01841 8 26803442 26806391 Arst3g00220 3 1541991 1546134 PCT