Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01839 ATGATCAGTTTCTGTAATTGTTTTGGGATAATCAAGAAAGGAAAAAATGAAAGCGCTAAGCAAAGTGTAAAAAAAATTTTCTCACGGGGACTGTTGCGTGGAGAAACAGAAGATGATTTCTCATATAGTGGTGAGTTTACTAGTAACACCACCAGTGGAGATGAAAGTGACAGCCAGCCTCGAGCCAACCGATCGGAGGAAATTTTGAACTTGAGAGCAGAGAAGGACATGGCTTGTAGGCGGGTTCCTGTCAAGGAGACCAACAAACTTGTTCGTGAAGAGGATGAAGATGGGAACAAAATGATCAATGAGTATGTTCGGGAGTACAGGATTGGTTCAGGTAGTTATGGCAAAGTGGTTCTATATCGAAGTATTGTAGATGGAAAGCATTATGCAATTAAGTCCTTTCATAAGTCCCATTTGCTGAAGCTTCGAGTTGCAGGCTCTGAAACCGCCATGTCTGACGTTCTGCGTGAGGTACTTATTATGAAAATGGTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCAGATTGCTTCTACATGGTGCTAGAATATGTGGAGGGCAAATGGTTTTGTGAGGGTTCAGGTCGTGGTTGTGCCTTGGTGGAAGACACTGTTAGGAAATACTTGCGTGATATAGTATCTGGATTAAGATATCTTCATGATCATAATATAATACATTTGGACATCAAACCCGATAATTTGTTGATTACTCGTGAGGGTAAAGTCAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGACAATAATGATATACTTTATCGATCACCTGGCACGCCTGTTTTCTCTGCACCAGAATGTTGTGTAGGCGGTACATATCATGGTAAAGCTTCAGACACATGGGCAGTTGGAGTTACTTTGTACTGTATGATAATGGGTGAATACCCATTTCTCGGAAAAACGCTTCCAGATACATATGAAAAGATAGTCAATAATCCATTAGTACTCCCGGATGACATTAACCCACAATTAAAGAACTTGATTGAAGGACTACTTTGCAAAGATCCAAAAGCAAGGATGACATTGAATGAAGTTGCAGAGCATAGCTGGGTTATTGGAGATGATGGGCCCATCAGTGAATACTTGTGTTGGTGCAAACAGAAGAGGCTTGTGGTGGAACAAGAACAACACCACCCTTAG 1185 0.4127 MISFCNCFGIIKKGKNESAKQSVKKIFSRGLLRGETEDDFSYSGEFTSNTTSGDESDSQPRANRSEEILNLRAEKDMACRRVPVKETNKLVREEDEDGNKMINEYVREYRIGSGSYGKVVLYRSIVDGKHYAIKSFHKSHLLKLRVAGSETAMSDVLREVLIMKMVEHPNIVNLIEVIDDPESDCFYMVLEYVEGKWFCEGSGRGCALVEDTVRKYLRDIVSGLRYLHDHNIIHLDIKPDNLLITREGKVKIGDFSVSQAFEDNNDILYRSPGTPVFSAPECCVGGTYHGKASDTWAVGVTLYCMIMGEYPFLGKTLPDTYEKIVNNPLVLPDDINPQLKNLIEGLLCKDPKARMTLNEVAEHSWVIGDDGPISEYLCWCKQKRLVVEQEQHHP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01839 394 SUPERFAMILY Protein kinase-like (PK-like) 101 379 IPR011009 -
Arst8g01839 394 Pfam Protein kinase domain 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01839 394 SMART serkin_6 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01839 394 ProSiteProfiles Protein kinase domain profile. 105 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01839 394 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Arst8g01839 394 CDD STKc_LKB1_CaMKK 111 366 - -
Arst8g01839 394 FunFam Serine/threonine-protein kinase GRIK2 95 394 - -
Arst8g01839 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Arst8g01839 394 MobiDBLite consensus disorder prediction 42 63 - -
Arst8g01839 394 MobiDBLite consensus disorder prediction 42 58 - -
Arst8g01839 394 Gene3D Transferase(Phosphotransferase) domain 1 95 392 - -
Arst8g01839 394 FunFam Serine/threonine-protein kinase Ssp1 99 201 - -
Arst8g01839 394 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 61 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01839 Arst-Chr8 26768250 26772833 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01839 111 373 CBL-interacting serine-threonine protein kinases AT5G35410 34.221 1.46e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Arst8g01839 Pkinase 4.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01839 K00908 - gmx:100776013 609.372