Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01830 ATGGAAGAAGGAGGAGGAGATCAACATGCCTCTAACAGCAGCTACACTTTTCCACCAGGTTTCAGATTCCACCCTTCTGATGAAGAACTCATAGTTCATTACCTACAAAACAGAATCAGCTCTCGTCCACTTCCAGCTTCCATTATAGCTGAGATTGATCTTTATAAGTATAACCCTTGGGATTTGCCAAAGAAGGCTTTGTTTGGAGAGGAAGAATGGTACTTCTTTAGCCCGAGAGATCGCAAGTATCCAAATGGATTGAGGCCAAACAGGGCAGCAGGTTCAGGGTACTGGAAGGCTACTGGAACTGACAAGCCGATTCTCACATCTTATGGATCGAAGCGCATCGGAGTGAAGAAAGCTCTTGTCTTCTATTTAGGTAGACCTCCAAAGGGGACTAAAACTGATTGGATCATGAATGAGTATAGATTGGTTGACACAATCACCAGCCCCTCCAGGCTCAAAGGTTCCATGCGCTTAGATGACTGGGTACTCTGTCGCGTTCGACACAAAGGCTACTCATCGAAGAACTCATGTGAGAATCAAGATAATCCTTGTGAACCAAACATGCTATCAAATCTGCCAAGGTGTGATGAAGGTTATCCAGCAACAAACATGAACTTCCATGCTGATATGATCACTGATTATCAATACAAAGACTATCAGATCCTAGCTTCTATCCTTGTTGGTGGCCATGTTCCTACCACTGAGAGCATGTCAAGTTTGAACTTGAAGGATGGCAAAGGCAATGATCCAATAACTTCAGTTCATGAAGATGGTTTCCACAGAGAAGATTCTTCTACAACAGTTTCTCCTTTGGACTGTTACTTCAACTCACTGAAAAGAAAATCTAATGAGGATAGCCAATATGAGAATCTCATTTCCTTTAACAGGAAGTTGAACATGGAGACCACAATGGATGATGAATCTTCTATCATCAATGGAGGTTTGAACTTCTACAATCAAAACCAGTCTCAAGATGACATAATATTCAATAAGAGAGCAGCAGAGCCTAGCATCAACTTTCAAGAGCTAAAGCAATCAGCTTTTATAGGAAGATACCCGCAATGCTCAAGTGATTGA 1083 0.4192 MEEGGGDQHASNSSYTFPPGFRFHPSDEELIVHYLQNRISSRPLPASIIAEIDLYKYNPWDLPKKALFGEEEWYFFSPRDRKYPNGLRPNRAAGSGYWKATGTDKPILTSYGSKRIGVKKALVFYLGRPPKGTKTDWIMNEYRLVDTITSPSRLKGSMRLDDWVLCRVRHKGYSSKNSCENQDNPCEPNMLSNLPRCDEGYPATNMNFHADMITDYQYKDYQILASILVGGHVPTTESMSSLNLKDGKGNDPITSVHEDGFHREDSSTTVSPLDCYFNSLKRKSNEDSQYENLISFNRKLNMETTMDDESSIINGGLNFYNQNQSQDDIIFNKRAAEPSINFQELKQSAFIGRYPQCSSD 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01830 360 FunFam NAC domain-containing protein 72-like 26 176 - -
Arst8g01830 360 ProSiteProfiles NAC domain profile. 17 171 IPR003441 GO:0003677|GO:0006355
Arst8g01830 360 SUPERFAMILY NAC domain 11 171 IPR036093 GO:0003677|GO:0006355
Arst8g01830 360 Pfam No apical meristem (NAM) protein 18 144 IPR003441 GO:0003677|GO:0006355
Arst8g01830 360 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 278 - -
Arst8g01830 360 Gene3D NAC domain 26 174 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01830 Arst-Chr8 26695840 26697659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01830 3 180 NAC Transcription Factor Family AT1G61110 64.516 9.55e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst8g01830 NAM 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01830 - - gmx:100817193 516.538