Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01826 ATGGAAATTGATCTGAACCATGCAGTGACTGAGGTTGAAAAGAATGCAACTTGCAATGGTGGCTGTCACAAAGAACAAGCAACTGCTTCTTGTGTGTGCTGTGTGCCATCATCATCATCATCATCATCGTCCACTGCTGTGTCTTCTTCTTCGTATCTGGAGCTATGGCATGCTTGTGCTGGCCCTCTTACTTCTCTCCCAAAGAAGGGGAATGTGGTTGTCTACTTCCCACAAGGGCACTTAGAGCAAGCTGCATCTTTCTCTCCCTTCACACCATTGGAGATTCCAACACATGATCTTCAACCACAGATCTTCTGTAGAGTTGTCAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTTTACACACAGGTCACTTTGCTTCCCCAGGCTGAGTTGGCAGGGATGGGGAAAGAGCTTCTTGAGGAATTGGGAGCTGATGAAGAAGGAAATGGAAGAACACCTACAAAAACAACACCTCACATGTTCTGCAAGACACTCACAGCCTCTGATACAAGCACTCATGGTGGTTTCTCTGTTCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTATTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTACAGAGGTCAGCCGAGGCGGCATCTACTCACTACCGGATGGAGTATTTTCGTTAGCCAAAAGAATCTTGTGTCCGGTGATGCTGTGCTTTTCCTAAGGGGTGAAAATGGAGAATTGAGATTGGGAATCAGAAGAGCTGTTCGACCAAGAAATGGTCTTCCTGAGTCTATTGTTGGTAACCAGAGTTGTTATCCCAATTTCCTTTCTTCTGTGGCTAATGCTATATCAGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGGGCAAGTCATGCAGATTTTGTTGTATCCTATCAAAAGTACGCCAAAAGCATCAAGAATCCGGTGACCATTGGCACAAGATTCAAAATGAAATTTGAGATGGATGAATCACCTGAAAGAAGGTGTACTAGTGGGATAGTGACTGGAATGAGTGATTTGGATCCATACAGATGGCCTAAATCAAAATGGAGGTGCTTAATGGTCAGATGGGATGAGGATATGGAGACTAATCATCAGGATCGAGTATCTCCATGGGAGATCGATCCTTCGGCTTCTCTCCCTCCATTGAGCATGCAGTGTTCCCCAAGGCTGAAGAAACTGCGGACAGGTCTGCAGGCTGCATCATCCAGTCACCTCATCACTGGAGGCACTGGGTTTATGGACTTGGAGGAGTCTGTAAGATCGCCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCCCTATATTTTGGACGTGACACAGTAACTAAGCAGCCAGGTTTTGAGATCAGTTCTCCCAATCATCCGAATCTTGCATCGGCCGGAGCAAGAAAGATGACTGCTGCTGAGCTTATGAGGGTTCACCCTCCTACTTATGCAGGCTTTGTGGAACCTAATAATAGGTTTCCGAGGGTCTTGCAAGGTCAAGAAATATGTCCACTAAGGTCCCTGACAGGGAAGGTTGATATGAATCTCGGTGCTTGGGGTAATAAACCAAGTAGTGCAAGTTGCACAACTTTCAACCTGCATCAAGCTACCAGACCAAAATTTGATTCTTTAGGATCAGAAGTCCTTCAAACTGCATATTTTCCTTATGGTGATATTCACAAAGCTGGTCATGGTAGCAGCATGTTGTGCTCTAAACCGTCGAGTTTCCAAAGAGATATTGCGCCGTTTAACACTCCTCTGACTCAGGCAGGGATAATTAGAAATGAAATTGGAAGGTCTGGCCCTTCAATCATGCATGAGCAGAAGCTGCCGGAGAATGTTTCCGCGGTTTCTTCTTTAGGGGGAAACAGCATGAGGATGCCAGTTCCGGATGAAGAGAATCTCAAGGGGAAGATAAATGGATGTAAACTATTTGGAGTTGCCTTGTCTGGAGAAACTACCACCCAAAATGCTAAAAGGAGCTGCACAAAGGTTCACAAGCAAGGCAGCTTAGTTGGAAGAGCAATCGATCTCTCAAGATTGAGCAGCTACACTGATCTCTTCACTGAACTTGAGAGACTCTTTGGCATGGAAGGCCTACTAAGAGATCCTGATAAGGGATGGAGGATCCTGTACACCGACAACGAAAACGACATCATGGTTGTCGGGGATGACCCGTGGCATGAGTTCTGCAATGTGGTATCAAAGATTCATATATATACGCAAGAGGAAGTGGAGAAGATGACAATTGGGATTATCAGTGATGATACACAGAGCTGTTTGGAACAGGCACCAGTCAATATGGAGGCTTCTAAGTCTTCCTCGGTGGGTCAGCCAGATTCTTCCCCAACAGTAGTTAGAGTCTAG 2418 0.4529 MEIDLNHAVTEVEKNATCNGGCHKEQATASCVCCVPSSSSSSSSTAVSSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPFTPLEIPTHDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMGKELLEELGADEEGNGRTPTKTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQSCYPNFLSSVANAISAKSMFHVFYSPRASHADFVVSYQKYAKSIKNPVTIGTRFKMKFEMDESPERRCTSGIVTGMSDLDPYRWPKSKWRCLMVRWDEDMETNHQDRVSPWEIDPSASLPPLSMQCSPRLKKLRTGLQAASSSHLITGGTGFMDLEESVRSPKVLQGQENTGFMSLYFGRDTVTKQPGFEISSPNHPNLASAGARKMTAAELMRVHPPTYAGFVEPNNRFPRVLQGQEICPLRSLTGKVDMNLGAWGNKPSSASCTTFNLHQATRPKFDSLGSEVLQTAYFPYGDIHKAGHGSSMLCSKPSSFQRDIAPFNTPLTQAGIIRNEIGRSGPSIMHEQKLPENVSAVSSLGGNSMRMPVPDEENLKGKINGCKLFGVALSGETTTQNAKRSCTKVHKQGSLVGRAIDLSRLSSYTDLFTELERLFGMEGLLRDPDKGWRILYTDNENDIMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIGIISDDTQSCLEQAPVNMEASKSSSVGQPDSSPTVVRV 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01826 805 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
Arst8g01826 805 SMART B3_2 164 266 IPR003340 GO:0003677
Arst8g01826 805 Gene3D - 672 766 - -
Arst8g01826 805 FunFam Auxin response factor 162 266 - -
Arst8g01826 805 SUPERFAMILY DNA-binding pseudobarrel domain 156 275 IPR015300 -
Arst8g01826 805 Gene3D - 328 400 - -
Arst8g01826 805 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 766 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst8g01826 805 FunFam Auxin response factor 672 766 - -
Arst8g01826 805 CDD B3_DNA 162 264 IPR003340 GO:0003677
Arst8g01826 805 ProSiteProfiles PB1 domain profile. 677 761 IPR000270 GO:0005515
Arst8g01826 805 Gene3D - 162 266 IPR015300 -
Arst8g01826 805 SUPERFAMILY CAD & PB1 domains 679 756 - -
Arst8g01826 805 Pfam Auxin response factor 290 372 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst8g01826 805 Pfam B3 DNA binding domain 164 265 IPR003340 GO:0003677
Arst8g01826 805 FunFam Auxin response factor 327 400 - -
Arst8g01826 805 MobiDBLite consensus disorder prediction 784 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01826 Arst-Chr8 26662469 26667033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01826 48 805 B3 DNA Binding Superfamily AT5G60450 60.598 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst8g01826 B3 1.9e-21 CL0405