Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01825 ATGGAAATTGATCTGAACCATGCAGTGACTGAGGTTGAAAAGAATGCAACTTGCAATGGTGGCTGTCACAAAGAACAAGCAACTGCTTCTTGTGTGTGCTGTGTGCCATCATCATCATCATCATCATCGTCCACTGCTGTGTCTTCTTCTTCGTATCTGGAGCTATGGCATGCTTGTGCTGGCCCTCTTACTTCTCTCCCAAAGAAGGGGAATGTGGTTGTCTACTTCCCACAAGGGCACTTAGAGCAAGCTGCATCTTTCTCTCCCTTCACACCATTGGAGATTCCAACACATGATCTTCAACCACAGATCTTCTGTAGAGTTGTCAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTTTACACACAGGTCACTTTGCTTCCCCAGGCTGAGTTGGCAGGGATGGGGAAAGAGCTTCTTGAGGAATTGGGAGCTGATGAAGAAGGAAATGGAAGAACACCTACAAAAACAACACCTCACATGTTCTGCAAGACACTCACAGCCTCTGATACAAGCACTCATGGTGGTTTCTCTGTTCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTATTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTACAGAGGTCAGCCGAGGCGGCATCTACTCACTACCGGATGGAGTATTTTCGTTAGCCAAAAGAATCTTGTGTCCGGTGATGCTGTGCTTTTCCTAAGGGGTGAAAATGGAGAATTGAGATTGGGAATCAGAAGAGCTGTTCGACCAAGAAATGGTCTTCCTGAGTCTATTGTTGGTAACCAGAGTTGTTATCCCAATTTCCTTTCTTCTGTGGCTAATGCTATATCAGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGGGCAAGTCATGCAGATTTTGTTGTATCCTATCAAAAGTACGCCAAAAGCATCAAGAATCCGGTGACCATTGGCACAAGATTCAAAATGAAATTTGAGATGGATGAATCACCTGAAAGAAGGTCAACAGTGGCAATAGCTATGAATATTTTAGATGCATATCTCTCACGAAAATTTATATCCTGTGAGGAACATGAATCAATCTTCTTACCTTGCAGGTGTACTAGTGGGATAGTGACTGGAATGAGTGATTTGGATCCATACAGATGGCCTAAATCAAAATGGAGGTGCTTAATGGTCAGATGGGATGAGGATATGGAGACTAATCATCAGGATCGAGTATCTCCATGGGAGATCGATCCTTCGGCTTCTCTCCCTCCATTGAGCATGCAGTGTTCCCCAAGGCTGAAGAAACTGCGGACAGGTCTGCAGGCTGCATCATCCAGTCACCTCATCACTGGAGGCACTGGGTTTATGGACTTGGAGGAGTCTGTAAGATCGCCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCCCTATATTTTGGACGTGACACAGTAACTAAGCAGCCAGGTTTTGAGATCAGTTCTCCCAATCATCCGAATCTTGCATCGGCCGGAGCAAGAAAGATGACTGCTGCTGAGCTTATGAGGGTTCACCCTCCTACTTATGCAGGCTTTGTGGAACCTAATAATAGGTTTCCGAGGGTCTTGCAAGGTCAAGAAATATGTCCACTAAGGTCCCTGACAGGGAAGGTTGATATGAATCTCGGTGCTTGGGGTAATAAACCAAGTAGTGCAAGTTGCACAACTTTCAACCTGCATCAAGCTACCAGACCAAAATTTGATTCTTTAGGATCAGAAGTCCTTCAAACTGCATATTTTCCTTATGGTGATATTCACAAAGCTGGTCATGGTAGCAGCATGTTGTGCTCTAAACCGTCGAGTTTCCAAAGAGATATTGCGCCGTTTAACACTCCTCTGACTCAGGCAGGGATAATTAGAAATGAAATTGGAAGGTCTGGCCCTTCAATCATGCATGAGCAGAAGCTGCCGGAGAATGTTTCCGCGGTTTCTTCTTTAGGGGGAAACAGCATGAGGATGCCAGTTCCGGATGAAGAGAATCTCAAGGGGAAGATAAATGGATGTAAACTATTTGGAGTTGCCTTGTCTGGAGAAACTACCACCCAAAATGCTAAAAGGAGCTGCACAAAGGTTCACAAGCAAGGCAGCTTAGTTGGAAGAGCAATCGATCTCTCAAGATTGAGCAGCTACACTGATCTCTTCACTGAACTTGAGAGACTCTTTGGCATGGAAGGCCTACTAAGAGATCCTGATAAGGGATGGAGGATCCTGTACACCGACAACGAAAACGACATCATGGTTGTCGGGGATGACCCGTGGCATGAGTTCTGCAATGTGGTATCAAAGATTCATATATATACGCAAGAGGAAGTGGAGAAGATGACAATTGGGATTATCAGTGATGATACACAGAGCTGTTTGGAACAGGCACCAGTCAATATGGAGGCTTCTAAGTCTTCCTCGGTGGGTCAGCCAGATTCTTCCCCAACAGTAGTTAGAGTCTAG 2514 0.4491 MEIDLNHAVTEVEKNATCNGGCHKEQATASCVCCVPSSSSSSSSTAVSSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPFTPLEIPTHDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMGKELLEELGADEEGNGRTPTKTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQSCYPNFLSSVANAISAKSMFHVFYSPRASHADFVVSYQKYAKSIKNPVTIGTRFKMKFEMDESPERRSTVAIAMNILDAYLSRKFISCEEHESIFLPCRCTSGIVTGMSDLDPYRWPKSKWRCLMVRWDEDMETNHQDRVSPWEIDPSASLPPLSMQCSPRLKKLRTGLQAASSSHLITGGTGFMDLEESVRSPKVLQGQENTGFMSLYFGRDTVTKQPGFEISSPNHPNLASAGARKMTAAELMRVHPPTYAGFVEPNNRFPRVLQGQEICPLRSLTGKVDMNLGAWGNKPSSASCTTFNLHQATRPKFDSLGSEVLQTAYFPYGDIHKAGHGSSMLCSKPSSFQRDIAPFNTPLTQAGIIRNEIGRSGPSIMHEQKLPENVSAVSSLGGNSMRMPVPDEENLKGKINGCKLFGVALSGETTTQNAKRSCTKVHKQGSLVGRAIDLSRLSSYTDLFTELERLFGMEGLLRDPDKGWRILYTDNENDIMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIGIISDDTQSCLEQAPVNMEASKSSSVGQPDSSPTVVRV 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01825 837 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
Arst8g01825 837 SMART B3_2 164 266 IPR003340 GO:0003677
Arst8g01825 837 Pfam Auxin response factor 290 349 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst8g01825 837 FunFam Auxin response factor 363 432 - -
Arst8g01825 837 Gene3D - 328 432 - -
Arst8g01825 837 CDD B3_DNA 162 264 IPR003340 GO:0003677
Arst8g01825 837 Pfam B3 DNA binding domain 164 265 IPR003340 GO:0003677
Arst8g01825 837 FunFam Auxin response factor 704 798 - -
Arst8g01825 837 FunFam Auxin response factor 162 266 - -
Arst8g01825 837 SUPERFAMILY CAD & PB1 domains 711 788 - -
Arst8g01825 837 Gene3D - 162 266 IPR015300 -
Arst8g01825 837 ProSiteProfiles PB1 domain profile. 709 793 IPR000270 GO:0005515
Arst8g01825 837 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 798 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst8g01825 837 SUPERFAMILY DNA-binding pseudobarrel domain 156 275 IPR015300 -
Arst8g01825 837 Gene3D - 704 798 - -
Arst8g01825 837 MobiDBLite consensus disorder prediction 816 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01825 Arst-Chr8 26662469 26667037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01825 48 837 B3 DNA Binding Superfamily AT5G60450 58.052 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst8g01825 B3 2e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01825 - - ahf:112706773 1684.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01825 8 26662469 26667037 Arst8g01825 8 26662469 26667037 ECH
Arst8g01825 8 26662469 26667037 Arst3g00237 3 1653070 1657749 PCT