Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01812 ATGGATCCTTCTAGTGGACAACACCATCAGGAACTGGAGAACATGATAGGATGCTCCACAAAGAGTCAGCAACAAGAAAGAAAGCCAAGGCCACAACCAGAACAAGCACTCAAATGTCCAAGATGTGACTCTACCAACACCAAATTCTGCTACTACAACAACTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAATCTTGCAGAAGATACTGGACCAAAGGTGGAACACTCAGGAATGTTCCTGTTGGTGGTGGATGCAGGAAGAACAAGAGATCTTCTAATTCTTCTTCTTCATCAACTACTTCCTCTTCATCTAATTCACCTGCACCCTCTTCAAGGAGGCCTCAAGATCATCATGGATTCATCTCACCTAATAATCCTCTCATCACTGCTTTCCCTCACTTGGCTTATGATCATCATCCTTCTTCTTCTCCCACCAGTGATCTCACCTTAGCCCTTGCAAGGCTCCAGAAACAAACAATGCCTTTTGATGATCATGATCTCTCAATCTTGGGCAACCCCACAAGCTCCCTCTGTGATATTCTTGGAAATCAAGGCCTTAACACCCACAACACTTCATCAACTGGCTTCTTGGAAGCACTTAGAACCGGATTCCAAGGAAACAATAGTAATAATAACGCTCTTCATCATCAGAATCTCTACTATTCATATGGGAATGGGGACATGGGTGAGGTTGTGGACAATGGTGCTGTTAATGCTGGAGACATGTTGCTACCTAATCATTATGATTCAGAGATGAGCAATGCAGCAACTCAAGCAGTGAGTGTCAGCACCATGAAGCAAGAACTATGCAGTGAAGCTACTAAGGTTCTTGGTGGTGGCGCTTTTCCATGGCATAACAGTAGTAATGGGGACACAAACATGGGTGAATTTGATTCAGCAAGAGCAACTTGGAATGCTGGTTTCACATCTTCAAATTGGCATGGCCTTCTCCATAGTCCTCTAATGTAA 972 0.4403 MDPSSGQHHQELENMIGCSTKSQQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSNSSSSSTTSSSSNSPAPSSRRPQDHHGFISPNNPLITAFPHLAYDHHPSSSPTSDLTLALARLQKQTMPFDDHDLSILGNPTSSLCDILGNQGLNTHNTSSTGFLEALRTGFQGNNSNNNALHHQNLYYSYGNGDMGEVVDNGAVNAGDMLLPNHYDSEMSNAATQAVSVSTMKQELCSEATKVLGGGAFPWHNSSNGDTNMGEFDSARATWNAGFTSSNWHGLLHSPLM 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01812 323 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 218 IPR045174 GO:0003700|GO:0006355
Arst8g01812 323 MobiDBLite consensus disorder prediction 1 26 - -
Arst8g01812 323 MobiDBLite consensus disorder prediction 1 38 - -
Arst8g01812 323 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Arst8g01812 323 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Arst8g01812 323 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Arst8g01812 323 MobiDBLite consensus disorder prediction 88 113 - -
Arst8g01812 323 MobiDBLite consensus disorder prediction 81 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01812 Arst-Chr8 26472248 26473610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01812 1 323 C2C2-Dof Transcription Factor Family AT2G28510 35.694 1.02e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst8g01812 zf-Dof 6.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01812 - - aip:107612899 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01812 8 26472248 26473610 Arst8g01812 8 26472248 26473610 ECH
Arst8g01812 8 26472248 26473610 Arst3g00255 3 1841265 1842828 PCT