Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01803 ATGGCCACTTCCGCCGCCACAACCGCTGCAGTGTCGCGCCAGCTCTCGCAAAAGGAGCAAGACATCCAAATGATGCTCGCAGCTGAGGTTCATCTCGGAACCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATGTGGTTTTATCTCATTTTGAGTTTGCTTTTCTATTTTTTTATTTTTTAAAATATGTGCAGCCCATTAAGGAAGGTGCTCTTGAAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGACTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAACAACCCATTGCAGCTGCACCTGCTAACTGGGCCCCAGACGCCACTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCTTTCGTTCCTGCACCCGGAGGTGTTGCCCCCACTGGCTGGGAATAA 720 0.4972 MATSAATTAAVSRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDVVLSHFEFAFLFFYFLKYVQPIKEGALENIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANWAPDATAGDWEPVPAPQAFVPAPGGVAPTGWE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01803 239 SUPERFAMILY Ribosomal protein S2 17 139 IPR023591 -
Arst8g01803 239 Pfam Ribosomal protein S2 73 121 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst8g01803 239 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst8g01803 239 Gene3D - 21 56 - -
Arst8g01803 239 Gene3D - 64 158 - -
Arst8g01803 239 PANTHER 40S RIBOSOMAL PROTEIN SA 12 52 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01803 Arst-Chr8 26391527 26393632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01803 1 53 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 66.038 2.25e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01803 K02998 - gmx:100786575 205.682