LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g01803	ATGGCCACTTCCGCCGCCACAACCGCTGCAGTGTCGCGCCAGCTCTCGCAAAAGGAGCAAGACATCCAAATGATGCTCGCAGCTGAGGTTCATCTCGGAACCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATGTGGTTTTATCTCATTTTGAGTTTGCTTTTCTATTTTTTTATTTTTTAAAATATGTGCAGCCCATTAAGGAAGGTGCTCTTGAAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGACTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAACAACCCATTGCAGCTGCACCTGCTAACTGGGCCCCAGACGCCACTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCTTTCGTTCCTGCACCCGGAGGTGTTGCCCCCACTGGCTGGGAATAA	720	0.4972	MATSAATTAAVSRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDVVLSHFEFAFLFFYFLKYVQPIKEGALENIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANWAPDATAGDWEPVPAPQAFVPAPGGVAPTGWE	239

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g01803	239	SUPERFAMILY	Ribosomal protein S2	17	139	IPR023591	-
	Arst8g01803	239	Pfam	Ribosomal protein S2	73	121	IPR001865	GO:0003735\|GO:0005840\|GO:0006412
	Arst8g01803	239	ProSitePatterns	Ribosomal protein S2 signature 1.	22	33	IPR018130	GO:0003735\|GO:0005840\|GO:0006412
	Arst8g01803	239	Gene3D	-	21	56	-	-
	Arst8g01803	239	Gene3D	-	64	158	-	-
	Arst8g01803	239	PANTHER	40S RIBOSOMAL PROTEIN SA	12	52	IPR005707	GO:0003735\|GO:0006412\|GO:0015935

Showing 1 to 6 of 6 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g01803	Arst-Chr8	26391527	26393632	Dispersed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g01803	1	53	Cytoplasmic Ribosomal Protein Gene Family	AT3G04770	66.038	2.25e-17	77.4

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g01803	K02998		-	gmx:100786575	205.682

Showing 1 to 1 of 1 entries