Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01799 ATGTTCGATCTTAACCTGAATGCCGATTCCACTCAGCACGATGACTCGCCCGTGCTGCTCGGGGAGAAGATTCCGGAAGCGTCCTCCGGGACCTCGAATTCCTCCGTGGTGAATGCGGAGGGTTCGAGCAACGGAGGTGGTGCCGGAGACGACGACTCGTGTTCCACACGCGCCACTGGTAGCGGCGATGTGTACACCTTCAATTTCGATATTCTGAAGGTGGAAGGCGGGAGCGACAACTCCGTCGCGACGAAGGAACTGTTTCCGGTGAGCGCCGGGAACTGGCAGGGGCAGGCTTCGACGTCGTCGATTCCGGCGAGGAAGAGCTGGATGGATCTGTCGCTGGATCAGCATCGAGGTGAAAGCGCGGAGAAGCAGCAGCAACAGCAACAACAGCCTCCGCAAGCGAAGAAGAGTAGGAGGGGCCCACGCTCAAGGAGCTCGCAGTACAGAGGTGTCACCTTCTACAGGAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTTTATTTGGGTGGATTTGACACCGCTCATGCCGCTGCTAGAGCTTATGATCGAGCTGCTATCAAGTTTAGGGGACTTGATGCTGACATCAATTTTAATCTCGTTGACTATGAGGACGATCTCAAACAGATGAAAAATCTCTCCAAGGAGGAATTTGTTCACATACTCCGTCGCCAAAGCACTGGTTTCTCAAGAGGAAGTTCAAAATACCGAGGAGTGACACTTCACAAATGTGGCCGGTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGGCTTATGACAAAGCAGCTATCAAATGCAATGGAAGAGAGGCAGTCACTAACTTCGAGCCAAGTACGTATGAAAGCGAGGTCAAAACTGAAGCCATTAGTGAAGGTGGCAGTCACAACCTTGACCTCAATTTAGGCATGGCTACCCCAGGACATGATCCCAAAGAAAACAGGGGGAATCTTCAGTTCCAGTCTGTCCCTTACGATGTGCATCCCGGAAGAAGTTCGAGGATGGAAACCCATGTTAATTCAGTTATTGGTGATCCGTCTTTTAAAAGGCTGGTTGTAAATGAAGAGCGTTCTTCTGTCTGGAATGCCTCGTATTCGAGTTTCTTTCCCAATGAGGAAAGAGCAGAGAGAATCGGCATAGATCCCTCACATGGAGTCCCAGGCTGGGCGTGGCAAACGCACGGTCCGGGCAGTGCTATCCCGGTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCAATTTCTGCTACCTATCCATCGCCTGCCATGTTTCCAACAAAACCGATGAACTCAATTCCTCAGAGTATCTCATTTGCTTCATCCGTTGCACCTGGTAGCAATGCAGCTCATCAATACTATTACCAGGTGAAGTCCCCGCACGCACCATCCTAA 1413 0.5124 MFDLNLNADSTQHDDSPVLLGEKIPEASSGTSNSSVVNAEGSSNGGGAGDDDSCSTRATGSGDVYTFNFDILKVEGGSDNSVATKELFPVSAGNWQGQASTSSIPARKSWMDLSLDQHRGESAEKQQQQQQQPPQAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVDYEDDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFEPSTYESEVKTEAISEGGSHNLDLNLGMATPGHDPKENRGNLQFQSVPYDVHPGRSSRMETHVNSVIGDPSFKRLVVNEERSSVWNASYSSFFPNEERAERIGIDPSHGVPGWAWQTHGPGSAIPVPPFSTAASSGFSISATYPSPAMFPTKPMNSIPQSISFASSVAPGSNAAHQYYYQVKSPHAPS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01799 470 MobiDBLite consensus disorder prediction 26 55 - -
Arst8g01799 470 MobiDBLite consensus disorder prediction 117 150 - -
Arst8g01799 470 SUPERFAMILY DNA-binding domain 148 205 IPR016177 GO:0003677
Arst8g01799 470 Gene3D AP2/ERF domain 148 207 IPR036955 GO:0003700|GO:0006355
Arst8g01799 470 Gene3D AP2/ERF domain 240 284 IPR036955 GO:0003700|GO:0006355
Arst8g01799 470 CDD AP2 149 204 IPR001471 GO:0003700|GO:0006355
Arst8g01799 470 SUPERFAMILY DNA-binding domain 240 284 IPR016177 GO:0003677
Arst8g01799 470 ProSiteProfiles AP2/ERF domain profile. 149 205 IPR001471 GO:0003700|GO:0006355
Arst8g01799 470 Pfam AP2 domain 149 197 IPR001471 GO:0003700|GO:0006355
Arst8g01799 470 SMART rav1_2 149 211 IPR001471 GO:0003700|GO:0006355
Arst8g01799 470 SMART rav1_2 241 289 IPR001471 GO:0003700|GO:0006355
Arst8g01799 470 CDD AP2 240 285 IPR001471 GO:0003700|GO:0006355
Arst8g01799 470 MobiDBLite consensus disorder prediction 124 138 - -
Arst8g01799 470 FunFam AP2-like ethylene-responsive transcription factor 148 207 - -
Arst8g01799 470 MobiDBLite consensus disorder prediction 1 55 - -
Arst8g01799 470 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 88 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01799 Arst-Chr8 26373448 26377576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01799 1 441 AP2-EREBP Transcription Factor Family AT5G60120 45.607 7.55e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst8g01799 AP2 2.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01799 K09284 - gmx:100777102 669.848