Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01798 ATGTTCGATCTTAACCTGAATGCCGATTCCACTCAGCACGATGACTCGCCCGTGCTGCTCGGGGAGAAGATTCCGGAAGCGTCCTCCGGGACCTCGAATTCCTCCGTGGTGAATGCGGAGGGTTCGAGCAACGGAGGTGGTGCCGGAGACGACGACTCGTGTTCCACACGCGCCACTGGTAGCGGCGATGTGTACACCTTCAATTTCGATATTCTGAAGGTGGAAGGCGGGAGCGACAACTCCGTCGCGACGAAGGAACTGTTTCCGGTGAGCGCCGGGAACTGGCAGGGGCAGGCTTCGACGTCGTCGATTCCGGCGAGGAAGAGCTGGATGGATCTGTCGCTGGATCAGCATCGAGGTGAAAGCGCGGAGAAGCAGCAGCAACAGCAACAACAGCCTCCGCAAGCGAAGAAGAGTAGGAGGGGCCCACGCTCAAGGAGCTCGCAGTACAGAGGTGTCACCTTCTACAGGAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTTTATTTGGGTGGATTTGACACCGCTCATGCCGCTGCTAGAGCTTATGATCGAGCTGCTATCAAGTTTAGGGGACTTGATGCTGACATCAATTTTAATCTCGTTGACTATGAGGACGATCTCAAACAGATGAAAAATCTCTCCAAGGAGGAATTTGTTCACATACTCCGTCGCCAAAGCACTGGTTTCTCAAGAGGAAGTTCAAAATACCGAGGAGTGACACTTCACAAATGTGGCCGGTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAAGCAGCTATCAAATGCAATGGAAGAGAGGCAGTCACTAACTTCGAGCCAAGTACGTATGAAAGCGAGGTCAAAACTGAAGCCATTAGTGAAGGTGGCAGTCACAACCTTGACCTCAATTTAGGCATGGCTACCCCAGGACATGATCCCAAAGAAAACAGGGGGAATCTTCAGTTCCAGTCTGTCCCTTACGATGTGCATCCCGGAAGAAGTTCGAGGATGGAAACCCATGTTAATTCAGTTATTGGTGATCCGTCTTTTAAAAGGCTGGTTGTAAATGAAGAGCGTTCTTCTGTCTGGAATGCCTCGTATTCGAGTTTCTTTCCCAATGAGGAAAGAGCAGAGAGAATCGGCATAGATCCCTCACATGGAGTCCCAGGCTGGGCGTGGCAAACGCACGGTCCGGGCAGTGCTATCCCGGTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCAATTTCTGCTACCTATCCATCGCCTGCCATGTTTCCAACAAAACCGATGAACTCAATTCCTCAGAGTATCTCATTTGCTTCATCCGTTGCACCTGGTAGCAATGCAGCTCATCAATACTATTACCAGGTGAAGTCCCCGCACGCACCATCCTAA 1458 0.5096 MFDLNLNADSTQHDDSPVLLGEKIPEASSGTSNSSVVNAEGSSNGGGAGDDDSCSTRATGSGDVYTFNFDILKVEGGSDNSVATKELFPVSAGNWQGQASTSSIPARKSWMDLSLDQHRGESAEKQQQQQQQPPQAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVDYEDDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYESEVKTEAISEGGSHNLDLNLGMATPGHDPKENRGNLQFQSVPYDVHPGRSSRMETHVNSVIGDPSFKRLVVNEERSSVWNASYSSFFPNEERAERIGIDPSHGVPGWAWQTHGPGSAIPVPPFSTAASSGFSISATYPSPAMFPTKPMNSIPQSISFASSVAPGSNAAHQYYYQVKSPHAPS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01798 485 MobiDBLite consensus disorder prediction 26 55 - -
Arst8g01798 485 MobiDBLite consensus disorder prediction 117 150 - -
Arst8g01798 485 SUPERFAMILY DNA-binding domain 148 205 IPR016177 GO:0003677
Arst8g01798 485 CDD AP2 149 204 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 FunFam AP2-like ethylene-responsive transcription factor 240 300 - -
Arst8g01798 485 ProSiteProfiles AP2/ERF domain profile. 149 205 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 88 336 - -
Arst8g01798 485 SMART rav1_2 149 211 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 SMART rav1_2 241 304 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 Gene3D AP2/ERF domain 240 299 IPR036955 GO:0003700|GO:0006355
Arst8g01798 485 Gene3D AP2/ERF domain 148 207 IPR036955 GO:0003700|GO:0006355
Arst8g01798 485 PRINTS Ethylene responsive element binding protein signature 242 253 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 PRINTS Ethylene responsive element binding protein signature 280 300 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 Pfam AP2 domain 149 197 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 Pfam AP2 domain 240 290 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 MobiDBLite consensus disorder prediction 124 138 - -
Arst8g01798 485 SUPERFAMILY DNA-binding domain 240 299 IPR016177 GO:0003677
Arst8g01798 485 CDD AP2 240 300 IPR001471 GO:0003700|GO:0006355
Arst8g01798 485 FunFam AP2-like ethylene-responsive transcription factor 148 207 - -
Arst8g01798 485 MobiDBLite consensus disorder prediction 1 55 - -
Arst8g01798 485 ProSiteProfiles AP2/ERF domain profile. 241 298 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01798 Arst-Chr8 26373447 26377651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01798 74 365 AP2-EREBP Transcription Factor Family AT4G36920 60.577 1.07e-98 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst8g01798 AP2 2.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01798 K09284 - gmx:100777102 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01798 8 26373447 26377651 Arst8g01798 8 26373447 26377651 ECH
Arst8g01798 8 26373447 26377651 Arst3g00268 3 1962654 1966461 PCT