Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01788 ATGGCAAGCACGTACAACAACCTCAAGGATATTGAGGCATCTTCAGACCACTTAATATTGAGGATTAAAGTGAGAGTCGTGAAAATATGGTCATTGTCTCCTGCTGAGCAAAAATACGTGAAGCCAACTTTAGAGTTGGTGGTCATGGATTACGTGGGGGATCGAATCCAGTGCACTATTAGGAATGCTCAGAGGAGGCTCTTTGAAGATGAGTTATCAGAGGGAAAAATCTATATTGTATGTAACTTCTCAACTTCCTTGAATGACCAGAAATACAAGGCCACTAATCATGCATGTAGGATATACTTCAAGAGGGATACTCAACTTCAGATGGTCCATGATCCATCCTTTTCGGAGAATGTGTTTCGTTTTGTTCCTAATGATCTAATATTGAACCACACAAATGCTCAGTCGCATCTTATAGATGTTATTGGTCTACTTACTGGCAAGGGTGACATAATTGAATTTACTAAGAATGGCAAGAAGTGCAGCTACATTGTTCTCGAGCTTGATGACATGCAGGGAAAAGGCAAGATTAGGTGTACACTTTGGGAGGATTTTGCAACTATGTTGGTCAAGCACATTGAAGAGCAACCAACATCAGAGTACATCATCATTGTACAGTTCGCTAAGTTCAACCTCTTTAAAGGTGCAATGGGCATATCAAATACCAATCATAATTCAATTCTCTACATCAATGCGGACTTCCAAGAGGTTAAGGATTTTCGCAAGAGCGTCGTCATGGCGGGGGTTCCACGTGCAAACCAACTATCCCAAATTGCTGCGGAGCCAGCGTACTCTATGGAGGACGATCTCATCAACGTCTCCATTTATAAACCCATTTCTGAACTCAAGGCATCCATTGAGAATGGTAGCTTCGTGACAATTGCAACTGTAATTGCAATTGACCCCTAG 915 0.4164 MASTYNNLKDIEASSDHLILRIKVRVVKIWSLSPAEQKYVKPTLELVVMDYVGDRIQCTIRNAQRRLFEDELSEGKIYIVCNFSTSLNDQKYKATNHACRIYFKRDTQLQMVHDPSFSENVFRFVPNDLILNHTNAQSHLIDVIGLLTGKGDIIEFTKNGKKCSYIVLELDDMQGKGKIRCTLWEDFATMLVKHIEEQPTSEYIIIVQFAKFNLFKGAMGISNTNHNSILYINADFQEVKDFRKSVVMAGVPRANQLSQIAAEPAYSMEDDLINVSIYKPISELKASIENGSFVTIATVIAIDP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01788 304 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
Arst8g01788 304 CDD RPA1_DBD_B_like 142 246 - -
Arst8g01788 304 Gene3D - 117 251 IPR012340 -
Arst8g01788 304 SUPERFAMILY Nucleic acid-binding proteins 7 117 IPR012340 -
Arst8g01788 304 Gene3D - 6 114 IPR012340 -
Arst8g01788 304 CDD RPA1_DBD_A_like 21 107 - -
Arst8g01788 304 SUPERFAMILY Nucleic acid-binding proteins 136 246 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01788 Arst-Chr8 26243197 26246914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01788 48 243 Core DNA Replication Machinery Family AT2G06510 27.586 1.34e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01788 - - ahf:112707100 594.349