Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01756 ATGGAAGGGAAGGATAGGGAAGTACTTTGTTTATTTATAGGCTGCTGTACTCTTTTCCTTGTAGTAAATTTCTCCGACATTCTCTTGTGTGTCTTCTTGAAAGCATACCGTTTTCTCATTAGGTGTCCTTCCTCCTCGGAAGTTAACCCTTCAAGCTCCCCTAATGATCTGCAGCATCATCAAGTTGTCATTGAGTCCTTCCCTGATATCTCTTCTCTACAAAGCGACGGCTTAGACAGCTCCGTCATAAGTTCTCTTCCGGTGTCGGAGTTCGAAAATGTGGGAGACCACAAGTCTATTAACGCAGATTGTGTCATTTGTCTGGGGGAATTTGAAAAAGGGGAGAAGCTTAAGCTGCTTCCTCAATGTGCTCATGCTTTCCATGTTTCTTGCATAGATGCATGGTTTCAGTCTCATTCCAATTGCCCACTTTGCAGGACCCAAGTCCATCATGTTGAAGATGCTATCGCCGGGTATTCAGTGTCTTCGTATCCATTGCTGGAAACTCTGAGGAGGGAAGACTTTTCCCGAGACAGCGATGAACTAATCCGATCCGTTCGGTCCGAGGTCATACAAGGCTGGTGTTGTGAGCCTCTTGCCATGGTATCAGAGCCTACTCCCTGA 624 0.4599 MEGKDREVLCLFIGCCTLFLVVNFSDILLCVFLKAYRFLIRCPSSSEVNPSSSPNDLQHHQVVIESFPDISSLQSDGLDSSVISSLPVSEFENVGDHKSINADCVICLGEFEKGEKLKLLPQCAHAFHVSCIDAWFQSHSNCPLCRTQVHHVEDAIAGYSVSSYPLLETLRREDFSRDSDELIRSVRSEVIQGWCCEPLAMVSEPTP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01756 207 FunFam E3 ubiquitin-protein ligase ATL6 60 152 - -
Arst8g01756 207 PANTHER RING-H2 FINGER PROTEIN ATL16 33 152 IPR044600 GO:0016567|GO:0016740
Arst8g01756 207 SUPERFAMILY RING/U-box 103 152 - -
Arst8g01756 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 152 IPR013083 -
Arst8g01756 207 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Arst8g01756 207 Pfam Ring finger domain 103 146 IPR001841 -
Arst8g01756 207 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01756 Arst-Chr8 25894735 25895455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01756 51 157 C3H Transcription Factor Family AT5G17600 44.860 4.37e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01756 - - adu:107461568 425.631