Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01753 ATGCCGATCTCTAAAATTGTGATTGGAAATGCTTCTGAGTTGAGGCAAAGCGATGCGCTTAAGGCCGCACTCGCTGAGTTCATCTCAATGCTTATCTTTGTTTTCGCCGGACAAGGCTCCGGCATGGCTTATAATAAGTTGACAAACAATGGCGCAGCAACACCAGCTGGCGTAGTGGCAGCATCATTGTCTCACGCCTTTGCTCTCTTTGTTGCAGTCTCCGTTGCCGCCAACATCTCCGGCGGCCACGTCAACCCTGCCGTCACTTTCGGCGCTTTCATTGGTGGCCACATCACTCTCCTCAGAACCATTCTCTATTGGATTGCTCAGTTGCTTGGCTCCGTTGTTGCTTGCTTGCTCCTTAAATTCGCCACAGCCGGACTAGAAACATCTGCATTTGCACTATCATCTGGGGTTGGAGCATCGAATGCATTGGTGTTTGAGATTGTGATGACCTTTGGTCTGGTGTACACGGTGTATGCTACTGCCGTGGACCCAAAGAAGGGTGACATTGGGATCATTGCTCCAATTGCCATTGGCTTCATTGTGGGTGCTAACATTTTAGCCGGTGGGGCATTTGATGGTGCATCCATGAACCCAGCTGTATCTTTTGGGCCTTCTGTTGTTAGCTGGAATTCCCCGTCACAGATTACTAGCACCATACTCACCTAA 672 0.497 MPISKIVIGNASELRQSDALKAALAEFISMLIFVFAGQGSGMAYNKLTNNGAATPAGVVAASLSHAFALFVAVSVAANISGGHVNPAVTFGAFIGGHITLLRTILYWIAQLLGSVVACLLLKFATAGLETSAFALSSGVGASNALVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPSVVSWNSPSQITSTILT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01753 223 Gene3D Glycerol uptake facilitator protein. 4 222 IPR023271 -
Arst8g01753 223 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Arst8g01753 223 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01753 223 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01753 223 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01753 223 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01753 223 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01753 223 Pfam Major intrinsic protein 13 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst8g01753 223 SUPERFAMILY Aquaporin-like 13 212 IPR023271 -
Arst8g01753 223 FunFam Probable aquaporin TIP1-1 4 217 - -
Arst8g01753 223 PANTHER AQUAPORIN-8 6 212 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01753 Arst-Chr8 25880392 25881279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01753 1 211 Major Intrinsic Protein MIP AT4G01470 81.043 5.12e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01753 K09873 - gmx:547794 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01753 8 25880392 25881279 Arst3g00304 3 2288077 2288563 PCT