Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01752 ATGGGACTTTATAGCAAAGGTTTCAGGTTTGAAGGTGGCGGGAGACACTTGATAGGTCTCAATCGAACTGGTAAGAGCTGCCGCCTCCGCTGGGTTAACTACCTCCACCCCGGCCTCAAACGTGGCAAGCTCACTCCCTTTGAAGAGAAGCTTGTCTTGGACCTCCACTCCAAGTGGGGCAATAGATGGTCAAGAATTGCTCGCAAGCTGCCCGGGCGCACGGACAACGAGATCAAGAATTACTTTAGAACTCACATGAGGAAGAAGGCTCAAGAGGAGAAGCGCGCGCTTGCATCACCAAGTTCTTCAAGCTGCCATTCCTCACTCTCTTCAAACAACAACAACAACCAAGCTGTTGATTCGCATGCTTCCAAGAAAGCTGGAGAAGAGAGCTTCTATGACACAGGGGGGCCGGTCATGACTGTGGACTGCTCAACCGATTTGAAGGAAGAAGAAGGGTTCTCCATGGATGATATATGGAAAGATATTGAGCTTTGTGAAGAGAAGAACATTGTTGTTTATGATGGGAATAAGAGTGAAGAGGGTTGCAACTTCTCAAGTCCACCATCATGGGAGTATTCTTCTGACCCACTTTGGGTGATGGATGAACAAAGTGTGTTATTCCCAACTAGTGACCCATATTTTTCCTCATTTCTAACTGGCTAA 666 0.4745 MGLYSKGFRFEGGGRHLIGLNRTGKSCRLRWVNYLHPGLKRGKLTPFEEKLVLDLHSKWGNRWSRIARKLPGRTDNEIKNYFRTHMRKKAQEEKRALASPSSSSCHSSLSSNNNNNQAVDSHASKKAGEESFYDTGGPVMTVDCSTDLKEEEGFSMDDIWKDIELCEEKNIVVYDGNKSEEGCNFSSPPSWEYSSDPLWVMDEQSVLFPTSDPYFSSFLTG 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01752 221 Gene3D - 44 129 - -
Arst8g01752 221 SUPERFAMILY Homeodomain-like 21 91 IPR009057 -
Arst8g01752 221 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 17 125 IPR044676 GO:0003700|GO:0006355|GO:0043565
Arst8g01752 221 Pfam Myb-like DNA-binding domain 41 85 IPR001005 -
Arst8g01752 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 90 IPR017930 -
Arst8g01752 221 FunFam MYB transcription factor 43 111 - -
Arst8g01752 221 CDD SANT 48 86 IPR001005 -
Arst8g01752 221 MobiDBLite consensus disorder prediction 89 134 - -
Arst8g01752 221 SMART sant 40 88 IPR001005 -
Arst8g01752 221 MobiDBLite consensus disorder prediction 96 122 - -
Arst8g01752 221 Gene3D - 11 40 - -
Arst8g01752 221 ProSiteProfiles Myb-like domain profile. 36 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01752 Arst-Chr8 25877568 25879374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01752 1 202 MYB Transcription Factor Family AT3G46130 58.095 9.54e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst8g01752 Myb_DNA-binding 9.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01752 K09422 - twl:120001543 269.24