Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01751 ATGGGAAAAATGGTTAACGAAGAGCAACAGAAGCAATCGCAGAAGCAGGAATTTCGAAAGGGGCCATGGACTGAGCAGGAGGACTTGAAGTTAGTTTCATTTGTGGGGCTGTTTGGAGACAGGAAATGGGACTTTATAGCAAAGGTTTCAGGTCTCAATCGAACTGGTAAGAGCTGCCGCCTCCGCTGGGTTAACTACCTCCACCCCGGCCTCAAACGTGGCAAGCTCACTCCCTTTGAAGAGAAGCTTGTCTTGGACCTCCACTCCAAGTGGGGCAATAGATGGTCAAGAATTGCTCGCAAGCTGCCCGGGCGCACGGACAACGAGATCAAGAATTACTTTAGAACTCACATGAGGAAGAAGGCTCAAGAGGAGAAGCGCGCGCTTGCATCACCAAGTTCTTCAAGCTGCCATTCCTCACTCTCTTCAAACAACAACAACAACCAAGCTGTTGATTCGCATGCTTCCAAGAAAGCTGGAGAAGAGAGCTTCTATGACACAGGGGGGCCGGTCATGACTGTGGACTGCTCAACCGATTTGAAGGAAGAAGAAGGGTTCTCCATGGATGATATATGGAAAGATATTGAGCTTTGTGAAGAGAAGAACATTGTTGTTTATGATGGGAATAAGAGTGAAGAGGGTTGCAACTTCTCAAGTCCACCATCATGGGAGTATTCTTCTGACCCACTTTGGGTGATGGATGAACAAAGTGTGTTATTCCCAACTAGTGACCCATATTTTTCCTCATTTCTAACTGGCTAA 762 0.4711 MGKMVNEEQQKQSQKQEFRKGPWTEQEDLKLVSFVGLFGDRKWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKLTPFEEKLVLDLHSKWGNRWSRIARKLPGRTDNEIKNYFRTHMRKKAQEEKRALASPSSSSCHSSLSSNNNNNQAVDSHASKKAGEESFYDTGGPVMTVDCSTDLKEEEGFSMDDIWKDIELCEEKNIVVYDGNKSEEGCNFSSPPSWEYSSDPLWVMDEQSVLFPTSDPYFSSFLTG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01751 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 122 IPR017930 -
Arst8g01751 253 SMART sant 72 120 IPR001005 -
Arst8g01751 253 SMART sant 19 69 IPR001005 -
Arst8g01751 253 MobiDBLite consensus disorder prediction 124 166 - -
Arst8g01751 253 Gene3D - 75 161 - -
Arst8g01751 253 CDD SANT 80 118 IPR001005 -
Arst8g01751 253 FunFam Myb transcription factor 20 72 - -
Arst8g01751 253 FunFam MYB transcription factor 75 143 - -
Arst8g01751 253 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Arst8g01751 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 71 IPR017930 -
Arst8g01751 253 MobiDBLite consensus disorder prediction 1 21 - -
Arst8g01751 253 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Arst8g01751 253 MobiDBLite consensus disorder prediction 128 154 - -
Arst8g01751 253 CDD SANT 22 67 IPR001005 -
Arst8g01751 253 Gene3D - 20 72 - -
Arst8g01751 253 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 157 IPR044676 GO:0003700|GO:0006355|GO:0043565
Arst8g01751 253 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Arst8g01751 253 Pfam Myb-like DNA-binding domain 73 117 IPR001005 -
Arst8g01751 253 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01751 Arst-Chr8 25877567 25879374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01751 15 234 MYB Transcription Factor Family AT5G59780 57.709 8.90e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst8g01751 Myb_DNA-binding 4.3e-15 CL0123